Protein–RNA interactions for Protein: Q62255

Sall3, Sal-like protein 3, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sall3Q62255 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC31.96■■■□□ 2.71
Sall3Q62255 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Sall3Q62255 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC31.96■■■□□ 2.71
Sall3Q62255 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
Sall3Q62255 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
Sall3Q62255 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC31.95■■■□□ 2.7
Sall3Q62255 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC31.95■■■□□ 2.7
Sall3Q62255 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
Sall3Q62255 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Sall3Q62255 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC31.94■■■□□ 2.7
Sall3Q62255 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Sall3Q62255 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Sall3Q62255 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC31.93■■■□□ 2.7
Sall3Q62255 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Sall3Q62255 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Sall3Q62255 Gm15039-201ENSMUST00000118914 875 ntBASIC31.93■■■□□ 2.7
Sall3Q62255 Rps24-207ENSMUST00000224568 714 ntBASIC31.93■■■□□ 2.7
Sall3Q62255 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Sall3Q62255 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
Sall3Q62255 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Sall3Q62255 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Sall3Q62255 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC31.92■■■□□ 2.7
Sall3Q62255 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC31.92■■■□□ 2.7
Sall3Q62255 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Sall3Q62255 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC31.91■■■□□ 2.7
Sall3Q62255 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Sall3Q62255 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Sall3Q62255 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Sall3Q62255 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC31.9■■■□□ 2.7
Sall3Q62255 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Sall3Q62255 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Sall3Q62255 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Sall3Q62255 Gm14117-201ENSMUST00000122417 843 ntBASIC31.89■■■□□ 2.7
Sall3Q62255 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Sall3Q62255 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Sall3Q62255 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
Sall3Q62255 Gm45102-201ENSMUST00000207427 857 ntBASIC31.88■■■□□ 2.69
Sall3Q62255 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC31.88■■■□□ 2.69
Sall3Q62255 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Sall3Q62255 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
Sall3Q62255 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC31.87■■■□□ 2.69
Sall3Q62255 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Sall3Q62255 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Sall3Q62255 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Sall3Q62255 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Sall3Q62255 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Sall3Q62255 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Sall3Q62255 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Sall3Q62255 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
Sall3Q62255 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Sall3Q62255 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Sall3Q62255 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Sall3Q62255 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
Sall3Q62255 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Sall3Q62255 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Sall3Q62255 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC31.84■■■□□ 2.69
Sall3Q62255 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Sall3Q62255 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
Sall3Q62255 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC31.83■■■□□ 2.69
Sall3Q62255 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC31.82■■■□□ 2.68
Sall3Q62255 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Sall3Q62255 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Sall3Q62255 Gm9959-201ENSMUST00000068277 390 ntBASIC31.82■■■□□ 2.68
Sall3Q62255 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
Sall3Q62255 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Sall3Q62255 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC31.81■■■□□ 2.68
Sall3Q62255 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
Sall3Q62255 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Sall3Q62255 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC31.8■■■□□ 2.68
Sall3Q62255 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Sall3Q62255 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Sall3Q62255 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Sall3Q62255 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
Sall3Q62255 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC31.79■■■□□ 2.68
Sall3Q62255 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
Sall3Q62255 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
Sall3Q62255 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC31.78■■■□□ 2.68
Sall3Q62255 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Sall3Q62255 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
Sall3Q62255 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
Sall3Q62255 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
Sall3Q62255 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Sall3Q62255 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Sall3Q62255 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Sall3Q62255 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Sall3Q62255 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
Sall3Q62255 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC31.76■■■□□ 2.68
Sall3Q62255 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Sall3Q62255 Gm7199-201ENSMUST00000118327 1485 ntBASIC31.76■■■□□ 2.67
Sall3Q62255 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Sall3Q62255 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Sall3Q62255 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC31.75■■■□□ 2.67
Sall3Q62255 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Sall3Q62255 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Sall3Q62255 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC31.73■■■□□ 2.67
Sall3Q62255 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC31.73■■■□□ 2.67
Sall3Q62255 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Sall3Q62255 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC31.73■■■□□ 2.67
Sall3Q62255 Gm42501-201ENSMUST00000200220 1026 ntBASIC31.73■■■□□ 2.67
Sall3Q62255 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms