Protein–RNA interactions for Protein: Q61850

Foxc2, Forkhead box protein C2, mousemouse

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc2Q61850 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
Foxc2Q61850 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Foxc2Q61850 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Foxc2Q61850 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.4■□□□□ 0.38
Foxc2Q61850 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Foxc2Q61850 Gm11687-201ENSMUST00000118911 886 ntBASIC17.4■□□□□ 0.38
Foxc2Q61850 Gm16437-201ENSMUST00000025669 507 ntBASIC17.4■□□□□ 0.38
Foxc2Q61850 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Foxc2Q61850 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Foxc2Q61850 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.4■□□□□ 0.38
Foxc2Q61850 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Foxc2Q61850 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Foxc2Q61850 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Foxc2Q61850 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Foxc2Q61850 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Foxc2Q61850 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Foxc2Q61850 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Foxc2Q61850 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Foxc2Q61850 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Foxc2Q61850 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Foxc2Q61850 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Foxc2Q61850 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Foxc2Q61850 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Foxc2Q61850 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Foxc2Q61850 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Foxc2Q61850 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Foxc2Q61850 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Foxc2Q61850 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Foxc2Q61850 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.37■□□□□ 0.37
Foxc2Q61850 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Foxc2Q61850 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Foxc2Q61850 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Foxc2Q61850 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Foxc2Q61850 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Foxc2Q61850 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Foxc2Q61850 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Foxc2Q61850 Mir6538-201ENSMUST00000183713 110 ntBASIC17.36■□□□□ 0.37
Foxc2Q61850 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Foxc2Q61850 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Foxc2Q61850 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Foxc2Q61850 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Foxc2Q61850 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.35■□□□□ 0.37
Foxc2Q61850 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.35■□□□□ 0.37
Foxc2Q61850 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Foxc2Q61850 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Foxc2Q61850 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Foxc2Q61850 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.35■□□□□ 0.37
Foxc2Q61850 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.35■□□□□ 0.37
Foxc2Q61850 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Foxc2Q61850 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Foxc2Q61850 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Foxc2Q61850 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Foxc2Q61850 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Foxc2Q61850 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Foxc2Q61850 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Foxc2Q61850 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Foxc2Q61850 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Foxc2Q61850 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Foxc2Q61850 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Foxc2Q61850 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Foxc2Q61850 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxc2Q61850 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxc2Q61850 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.32■□□□□ 0.36
Foxc2Q61850 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxc2Q61850 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxc2Q61850 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.32■□□□□ 0.36
Foxc2Q61850 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Foxc2Q61850 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Foxc2Q61850 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Foxc2Q61850 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxc2Q61850 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.31■□□□□ 0.36
Foxc2Q61850 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Foxc2Q61850 Terc-201ENSMUST00000082862 423 ntBASIC17.31■□□□□ 0.36
Foxc2Q61850 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxc2Q61850 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Foxc2Q61850 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Foxc2Q61850 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxc2Q61850 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxc2Q61850 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxc2Q61850 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxc2Q61850 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxc2Q61850 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Foxc2Q61850 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxc2Q61850 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxc2Q61850 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Foxc2Q61850 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.29■□□□□ 0.36
Foxc2Q61850 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxc2Q61850 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxc2Q61850 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.28■□□□□ 0.36
Foxc2Q61850 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxc2Q61850 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxc2Q61850 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Foxc2Q61850 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Foxc2Q61850 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.27■□□□□ 0.36
Foxc2Q61850 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Foxc2Q61850 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Foxc2Q61850 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Foxc2Q61850 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxc2Q61850 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Foxc2Q61850 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms