Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC33.53■■■□□ 2.96
Ptch1Q61115 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
Ptch1Q61115 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC33.53■■■□□ 2.96
Ptch1Q61115 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC33.52■■■□□ 2.96
Ptch1Q61115 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC33.52■■■□□ 2.96
Ptch1Q61115 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC33.52■■■□□ 2.96
Ptch1Q61115 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
Ptch1Q61115 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
Ptch1Q61115 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
Ptch1Q61115 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC33.5■■■□□ 2.95
Ptch1Q61115 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Ptch1Q61115 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
Ptch1Q61115 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Ptch1Q61115 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC33.48■■■□□ 2.95
Ptch1Q61115 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC33.48■■■□□ 2.95
Ptch1Q61115 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Ptch1Q61115 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC33.47■■■□□ 2.95
Ptch1Q61115 Serp2-204ENSMUST00000228055 705 ntBASIC33.47■■■□□ 2.95
Ptch1Q61115 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Ptch1Q61115 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC33.47■■■□□ 2.95
Ptch1Q61115 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC33.46■■■□□ 2.95
Ptch1Q61115 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC33.46■■■□□ 2.95
Ptch1Q61115 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Ptch1Q61115 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC33.46■■■□□ 2.95
Ptch1Q61115 Gm5131-201ENSMUST00000212776 1238 ntBASIC33.45■■■□□ 2.94
Ptch1Q61115 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Ptch1Q61115 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC33.44■■■□□ 2.94
Ptch1Q61115 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Ptch1Q61115 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC33.43■■■□□ 2.94
Ptch1Q61115 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC33.43■■■□□ 2.94
Ptch1Q61115 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Ptch1Q61115 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC33.42■■■□□ 2.94
Ptch1Q61115 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Ptch1Q61115 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC33.4■■■□□ 2.94
Ptch1Q61115 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Ptch1Q61115 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Ptch1Q61115 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC33.4■■■□□ 2.94
Ptch1Q61115 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC33.39■■■□□ 2.94
Ptch1Q61115 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Ptch1Q61115 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
Ptch1Q61115 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
Ptch1Q61115 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
Ptch1Q61115 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC33.38■■■□□ 2.93
Ptch1Q61115 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
Ptch1Q61115 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
Ptch1Q61115 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC33.36■■■□□ 2.93
Ptch1Q61115 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC33.36■■■□□ 2.93
Ptch1Q61115 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC33.36■■■□□ 2.93
Ptch1Q61115 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC33.36■■■□□ 2.93
Ptch1Q61115 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC33.35■■■□□ 2.93
Ptch1Q61115 Gm21956-201ENSMUST00000179946 522 ntBASIC33.35■■■□□ 2.93
Ptch1Q61115 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC33.35■■■□□ 2.93
Ptch1Q61115 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC33.34■■■□□ 2.93
Ptch1Q61115 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
Ptch1Q61115 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Ptch1Q61115 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC33.33■■■□□ 2.93
Ptch1Q61115 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
Ptch1Q61115 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC33.33■■■□□ 2.93
Ptch1Q61115 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC33.33■■■□□ 2.93
Ptch1Q61115 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Ptch1Q61115 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
Ptch1Q61115 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC33.32■■■□□ 2.93
Ptch1Q61115 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
Ptch1Q61115 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC33.31■■■□□ 2.92
Ptch1Q61115 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Ptch1Q61115 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Ptch1Q61115 AC153504.1-201ENSMUST00000218379 2290 ntBASIC33.3■■■□□ 2.92
Ptch1Q61115 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC33.29■■■□□ 2.92
Ptch1Q61115 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC33.28■■■□□ 2.92
Ptch1Q61115 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Ptch1Q61115 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC33.28■■■□□ 2.92
Ptch1Q61115 Gm13241-201ENSMUST00000094493 780 ntBASIC33.28■■■□□ 2.92
Ptch1Q61115 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
Ptch1Q61115 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Ptch1Q61115 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC33.26■■■□□ 2.92
Ptch1Q61115 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.92
Ptch1Q61115 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
Ptch1Q61115 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
Ptch1Q61115 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Ptch1Q61115 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Ptch1Q61115 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
Ptch1Q61115 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC33.25■■■□□ 2.91
Ptch1Q61115 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC33.24■■■□□ 2.91
Ptch1Q61115 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Ptch1Q61115 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC33.24■■■□□ 2.91
Ptch1Q61115 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
Ptch1Q61115 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC33.23■■■□□ 2.91
Ptch1Q61115 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
Ptch1Q61115 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC33.21■■■□□ 2.91
Ptch1Q61115 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC33.21■■■□□ 2.91
Ptch1Q61115 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
Ptch1Q61115 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
Ptch1Q61115 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
Ptch1Q61115 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC33.19■■■□□ 2.9
Ptch1Q61115 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Ptch1Q61115 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Ptch1Q61115 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC33.18■■■□□ 2.9
Ptch1Q61115 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC33.17■■■□□ 2.9
Ptch1Q61115 Gm43034-201ENSMUST00000198678 1364 ntBASIC33.17■■■□□ 2.9
Ptch1Q61115 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms