Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.33■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.31■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.3■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17.29■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.28■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.28■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.28■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.27■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trav15-1-dv6-1Q5R1D2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.27■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.26■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.25■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.24■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.22■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.22■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.22■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.22■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.21■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trav15-1-dv6-1Q5R1D2 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.19■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Gm37136-201ENSMUST00000194368 194 ntBASIC17.19■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.18■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms