Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.28■■□□□ 1
Lin28bQ45KJ6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lin28bQ45KJ6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lin28bQ45KJ6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lin28bQ45KJ6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lin28bQ45KJ6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.27■■□□□ 1
Lin28bQ45KJ6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Lin28bQ45KJ6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
Lin28bQ45KJ6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lin28bQ45KJ6 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lin28bQ45KJ6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lin28bQ45KJ6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lin28bQ45KJ6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.26■□□□□ 0.99
Lin28bQ45KJ6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lin28bQ45KJ6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lin28bQ45KJ6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lin28bQ45KJ6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Lin28bQ45KJ6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Lin28bQ45KJ6 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Lin28bQ45KJ6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lin28bQ45KJ6 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lin28bQ45KJ6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lin28bQ45KJ6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lin28bQ45KJ6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lin28bQ45KJ6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.23■□□□□ 0.99
Lin28bQ45KJ6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lin28bQ45KJ6 Gm13238-201ENSMUST00000117655 780 ntBASIC21.23■□□□□ 0.99
Lin28bQ45KJ6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lin28bQ45KJ6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.23■□□□□ 0.99
Lin28bQ45KJ6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.22■□□□□ 0.99
Lin28bQ45KJ6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Lin28bQ45KJ6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Lin28bQ45KJ6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Lin28bQ45KJ6 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lin28bQ45KJ6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Lin28bQ45KJ6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lin28bQ45KJ6 Gm15546-201ENSMUST00000122095 826 ntBASIC21.2■□□□□ 0.98
Lin28bQ45KJ6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lin28bQ45KJ6 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Lin28bQ45KJ6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.2■□□□□ 0.98
Lin28bQ45KJ6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Lin28bQ45KJ6 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.19■□□□□ 0.98
Lin28bQ45KJ6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lin28bQ45KJ6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lin28bQ45KJ6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lin28bQ45KJ6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.18■□□□□ 0.98
Lin28bQ45KJ6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lin28bQ45KJ6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lin28bQ45KJ6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lin28bQ45KJ6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Lin28bQ45KJ6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lin28bQ45KJ6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lin28bQ45KJ6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lin28bQ45KJ6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lin28bQ45KJ6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lin28bQ45KJ6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lin28bQ45KJ6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lin28bQ45KJ6 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.16■□□□□ 0.98
Lin28bQ45KJ6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.16■□□□□ 0.98
Lin28bQ45KJ6 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lin28bQ45KJ6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lin28bQ45KJ6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lin28bQ45KJ6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Lin28bQ45KJ6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.15■□□□□ 0.98
Lin28bQ45KJ6 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lin28bQ45KJ6 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.15■□□□□ 0.98
Lin28bQ45KJ6 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lin28bQ45KJ6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lin28bQ45KJ6 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Lin28bQ45KJ6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.14■□□□□ 0.97
Lin28bQ45KJ6 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Lin28bQ45KJ6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lin28bQ45KJ6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.13■□□□□ 0.97
Lin28bQ45KJ6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.13■□□□□ 0.97
Lin28bQ45KJ6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.13■□□□□ 0.97
Lin28bQ45KJ6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lin28bQ45KJ6 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lin28bQ45KJ6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lin28bQ45KJ6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Lin28bQ45KJ6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Lin28bQ45KJ6 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lin28bQ45KJ6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lin28bQ45KJ6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lin28bQ45KJ6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lin28bQ45KJ6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lin28bQ45KJ6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lin28bQ45KJ6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Lin28bQ45KJ6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lin28bQ45KJ6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lin28bQ45KJ6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lin28bQ45KJ6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Lin28bQ45KJ6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.1■□□□□ 0.97
Lin28bQ45KJ6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lin28bQ45KJ6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lin28bQ45KJ6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lin28bQ45KJ6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lin28bQ45KJ6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Lin28bQ45KJ6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Lin28bQ45KJ6 Gm22567-201ENSMUST00000175542 342 ntBASIC21.09■□□□□ 0.97
Lin28bQ45KJ6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms