Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Gm5921-201ENSMUST00000075898 882 ntBASIC23.98■■□□□ 1.43
Smcr8Q3UMB5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Smcr8Q3UMB5 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Smcr8Q3UMB5 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Smcr8Q3UMB5 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Smcr8Q3UMB5 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Smcr8Q3UMB5 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Smcr8Q3UMB5 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.95■■□□□ 1.42
Smcr8Q3UMB5 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Smcr8Q3UMB5 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Smcr8Q3UMB5 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Smcr8Q3UMB5 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Smcr8Q3UMB5 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.94■■□□□ 1.42
Smcr8Q3UMB5 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Smcr8Q3UMB5 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Smcr8Q3UMB5 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Smcr8Q3UMB5 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Smcr8Q3UMB5 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Smcr8Q3UMB5 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Smcr8Q3UMB5 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Smcr8Q3UMB5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Smcr8Q3UMB5 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Smcr8Q3UMB5 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Smcr8Q3UMB5 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Smcr8Q3UMB5 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Smcr8Q3UMB5 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Smcr8Q3UMB5 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Smcr8Q3UMB5 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Smcr8Q3UMB5 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Smcr8Q3UMB5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.89■■□□□ 1.41
Smcr8Q3UMB5 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Smcr8Q3UMB5 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Smcr8Q3UMB5 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Smcr8Q3UMB5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Smcr8Q3UMB5 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Smcr8Q3UMB5 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smcr8Q3UMB5 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smcr8Q3UMB5 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smcr8Q3UMB5 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Smcr8Q3UMB5 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Smcr8Q3UMB5 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.85■■□□□ 1.41
Smcr8Q3UMB5 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Smcr8Q3UMB5 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Smcr8Q3UMB5 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Smcr8Q3UMB5 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Smcr8Q3UMB5 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Smcr8Q3UMB5 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Smcr8Q3UMB5 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.84■■□□□ 1.41
Smcr8Q3UMB5 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.84■■□□□ 1.41
Smcr8Q3UMB5 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC23.83■■□□□ 1.41
Smcr8Q3UMB5 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Smcr8Q3UMB5 Gm5812-201ENSMUST00000061073 957 ntBASIC23.83■■□□□ 1.41
Smcr8Q3UMB5 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Smcr8Q3UMB5 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smcr8Q3UMB5 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smcr8Q3UMB5 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smcr8Q3UMB5 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.82■■□□□ 1.4
Smcr8Q3UMB5 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Smcr8Q3UMB5 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Smcr8Q3UMB5 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Smcr8Q3UMB5 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Smcr8Q3UMB5 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Smcr8Q3UMB5 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Smcr8Q3UMB5 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Smcr8Q3UMB5 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Smcr8Q3UMB5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.8■■□□□ 1.4
Smcr8Q3UMB5 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.8■■□□□ 1.4
Smcr8Q3UMB5 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.8■■□□□ 1.4
Smcr8Q3UMB5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Smcr8Q3UMB5 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Smcr8Q3UMB5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Smcr8Q3UMB5 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Smcr8Q3UMB5 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Smcr8Q3UMB5 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.79■■□□□ 1.4
Smcr8Q3UMB5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Smcr8Q3UMB5 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Smcr8Q3UMB5 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Smcr8Q3UMB5 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Smcr8Q3UMB5 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Smcr8Q3UMB5 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
Smcr8Q3UMB5 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.78■■□□□ 1.4
Smcr8Q3UMB5 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Smcr8Q3UMB5 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Smcr8Q3UMB5 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.77■■□□□ 1.4
Smcr8Q3UMB5 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Smcr8Q3UMB5 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Smcr8Q3UMB5 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Smcr8Q3UMB5 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Smcr8Q3UMB5 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC23.76■■□□□ 1.39
Smcr8Q3UMB5 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Smcr8Q3UMB5 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Smcr8Q3UMB5 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Smcr8Q3UMB5 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Smcr8Q3UMB5 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Smcr8Q3UMB5 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Smcr8Q3UMB5 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Smcr8Q3UMB5 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Smcr8Q3UMB5 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Smcr8Q3UMB5 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Smcr8Q3UMB5 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms