Protein–RNA interactions for Protein: Q3ULP7

Ctsll3, Cathepsin L-like 3, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctsll3Q3ULP7 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ctsll3Q3ULP7 Gm9959-201ENSMUST00000068277 390 ntBASIC20.73■□□□□ 0.91
Ctsll3Q3ULP7 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ctsll3Q3ULP7 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Ctsll3Q3ULP7 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctsll3Q3ULP7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ctsll3Q3ULP7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.72■□□□□ 0.91
Ctsll3Q3ULP7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctsll3Q3ULP7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctsll3Q3ULP7 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctsll3Q3ULP7 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ctsll3Q3ULP7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctsll3Q3ULP7 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctsll3Q3ULP7 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ctsll3Q3ULP7 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctsll3Q3ULP7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.7■□□□□ 0.9
Ctsll3Q3ULP7 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.7■□□□□ 0.9
Ctsll3Q3ULP7 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctsll3Q3ULP7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctsll3Q3ULP7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctsll3Q3ULP7 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.7■□□□□ 0.9
Ctsll3Q3ULP7 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ctsll3Q3ULP7 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ctsll3Q3ULP7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ctsll3Q3ULP7 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ctsll3Q3ULP7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ctsll3Q3ULP7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Ctsll3Q3ULP7 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ctsll3Q3ULP7 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctsll3Q3ULP7 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctsll3Q3ULP7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ctsll3Q3ULP7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.67■□□□□ 0.9
Ctsll3Q3ULP7 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctsll3Q3ULP7 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctsll3Q3ULP7 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ctsll3Q3ULP7 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctsll3Q3ULP7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Ctsll3Q3ULP7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ctsll3Q3ULP7 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ctsll3Q3ULP7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ctsll3Q3ULP7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.65■□□□□ 0.9
Ctsll3Q3ULP7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ctsll3Q3ULP7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ctsll3Q3ULP7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ctsll3Q3ULP7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ctsll3Q3ULP7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.64■□□□□ 0.89
Ctsll3Q3ULP7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ctsll3Q3ULP7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ctsll3Q3ULP7 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ctsll3Q3ULP7 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ctsll3Q3ULP7 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ctsll3Q3ULP7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.63■□□□□ 0.89
Ctsll3Q3ULP7 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ctsll3Q3ULP7 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.62■□□□□ 0.89
Ctsll3Q3ULP7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ctsll3Q3ULP7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.62■□□□□ 0.89
Ctsll3Q3ULP7 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ctsll3Q3ULP7 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ctsll3Q3ULP7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ctsll3Q3ULP7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ctsll3Q3ULP7 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ctsll3Q3ULP7 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ctsll3Q3ULP7 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ctsll3Q3ULP7 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ctsll3Q3ULP7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.6■□□□□ 0.89
Ctsll3Q3ULP7 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.6■□□□□ 0.89
Ctsll3Q3ULP7 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ctsll3Q3ULP7 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ctsll3Q3ULP7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ctsll3Q3ULP7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ctsll3Q3ULP7 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ctsll3Q3ULP7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ctsll3Q3ULP7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ctsll3Q3ULP7 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.58■□□□□ 0.89
Ctsll3Q3ULP7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ctsll3Q3ULP7 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ctsll3Q3ULP7 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Ctsll3Q3ULP7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.57■□□□□ 0.88
Ctsll3Q3ULP7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctsll3Q3ULP7 Gm10232-201ENSMUST00000089221 720 ntBASIC20.57■□□□□ 0.88
Ctsll3Q3ULP7 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.57■□□□□ 0.88
Ctsll3Q3ULP7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctsll3Q3ULP7 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ctsll3Q3ULP7 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.56■□□□□ 0.88
Ctsll3Q3ULP7 Etf1-202ENSMUST00000180351 108 ntBASIC20.56■□□□□ 0.88
Ctsll3Q3ULP7 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ctsll3Q3ULP7 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.56■□□□□ 0.88
Ctsll3Q3ULP7 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ctsll3Q3ULP7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ctsll3Q3ULP7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctsll3Q3ULP7 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
Ctsll3Q3ULP7 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctsll3Q3ULP7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctsll3Q3ULP7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ctsll3Q3ULP7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ctsll3Q3ULP7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.54■□□□□ 0.88
Ctsll3Q3ULP7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ctsll3Q3ULP7 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ctsll3Q3ULP7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ctsll3Q3ULP7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms