Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Tnrc6aQ3UHK8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnrc6aQ3UHK8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnrc6aQ3UHK8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.03■□□□□ 0.96
Tnrc6aQ3UHK8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tnrc6aQ3UHK8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tnrc6aQ3UHK8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnrc6aQ3UHK8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Tnrc6aQ3UHK8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Tnrc6aQ3UHK8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnrc6aQ3UHK8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnrc6aQ3UHK8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.01■□□□□ 0.95
Tnrc6aQ3UHK8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tnrc6aQ3UHK8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.01■□□□□ 0.95
Tnrc6aQ3UHK8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.01■□□□□ 0.95
Tnrc6aQ3UHK8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnrc6aQ3UHK8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnrc6aQ3UHK8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tnrc6aQ3UHK8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Tnrc6aQ3UHK8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tnrc6aQ3UHK8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tnrc6aQ3UHK8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.99■□□□□ 0.95
Tnrc6aQ3UHK8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tnrc6aQ3UHK8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tnrc6aQ3UHK8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnrc6aQ3UHK8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnrc6aQ3UHK8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Tnrc6aQ3UHK8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tnrc6aQ3UHK8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tnrc6aQ3UHK8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnrc6aQ3UHK8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnrc6aQ3UHK8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnrc6aQ3UHK8 Gm15820-201ENSMUST00000201566 728 ntBASIC20.96■□□□□ 0.95
Tnrc6aQ3UHK8 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.96■□□□□ 0.95
Tnrc6aQ3UHK8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnrc6aQ3UHK8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tnrc6aQ3UHK8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tnrc6aQ3UHK8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tnrc6aQ3UHK8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.95■□□□□ 0.94
Tnrc6aQ3UHK8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Tnrc6aQ3UHK8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.95■□□□□ 0.94
Tnrc6aQ3UHK8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tnrc6aQ3UHK8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.94■□□□□ 0.94
Tnrc6aQ3UHK8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tnrc6aQ3UHK8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tnrc6aQ3UHK8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tnrc6aQ3UHK8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Tnrc6aQ3UHK8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tnrc6aQ3UHK8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tnrc6aQ3UHK8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Tnrc6aQ3UHK8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tnrc6aQ3UHK8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tnrc6aQ3UHK8 Gm14117-201ENSMUST00000122417 843 ntBASIC20.92■□□□□ 0.94
Tnrc6aQ3UHK8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.92■□□□□ 0.94
Tnrc6aQ3UHK8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Tnrc6aQ3UHK8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tnrc6aQ3UHK8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Tnrc6aQ3UHK8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tnrc6aQ3UHK8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tnrc6aQ3UHK8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tnrc6aQ3UHK8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Tnrc6aQ3UHK8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Tnrc6aQ3UHK8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tnrc6aQ3UHK8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Tnrc6aQ3UHK8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tnrc6aQ3UHK8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tnrc6aQ3UHK8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
Tnrc6aQ3UHK8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tnrc6aQ3UHK8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tnrc6aQ3UHK8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tnrc6aQ3UHK8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Tnrc6aQ3UHK8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Tnrc6aQ3UHK8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Tnrc6aQ3UHK8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tnrc6aQ3UHK8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tnrc6aQ3UHK8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tnrc6aQ3UHK8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Tnrc6aQ3UHK8 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.88■□□□□ 0.93
Tnrc6aQ3UHK8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tnrc6aQ3UHK8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnrc6aQ3UHK8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tnrc6aQ3UHK8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.87■□□□□ 0.93
Tnrc6aQ3UHK8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Tnrc6aQ3UHK8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnrc6aQ3UHK8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnrc6aQ3UHK8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.86■□□□□ 0.93
Tnrc6aQ3UHK8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.86■□□□□ 0.93
Tnrc6aQ3UHK8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.86■□□□□ 0.93
Tnrc6aQ3UHK8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.86■□□□□ 0.93
Tnrc6aQ3UHK8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnrc6aQ3UHK8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Tnrc6aQ3UHK8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnrc6aQ3UHK8 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.84■□□□□ 0.93
Tnrc6aQ3UHK8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Tnrc6aQ3UHK8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnrc6aQ3UHK8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.84■□□□□ 0.93
Tnrc6aQ3UHK8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.84■□□□□ 0.93
Tnrc6aQ3UHK8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.84■□□□□ 0.93
Tnrc6aQ3UHK8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnrc6aQ3UHK8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 274.2 ms