Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Brf2Q3UAW9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.94■□□□□ 0.94
Brf2Q3UAW9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Brf2Q3UAW9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Brf2Q3UAW9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.93■□□□□ 0.94
Brf2Q3UAW9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.93■□□□□ 0.94
Brf2Q3UAW9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Brf2Q3UAW9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Brf2Q3UAW9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Brf2Q3UAW9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Brf2Q3UAW9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.92■□□□□ 0.94
Brf2Q3UAW9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Brf2Q3UAW9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Brf2Q3UAW9 Gm6311-201ENSMUST00000073790 878 ntBASIC20.92■□□□□ 0.94
Brf2Q3UAW9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Brf2Q3UAW9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Brf2Q3UAW9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
Brf2Q3UAW9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Brf2Q3UAW9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Brf2Q3UAW9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.91■□□□□ 0.94
Brf2Q3UAW9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Brf2Q3UAW9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.91■□□□□ 0.94
Brf2Q3UAW9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.91■□□□□ 0.94
Brf2Q3UAW9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Brf2Q3UAW9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Brf2Q3UAW9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Brf2Q3UAW9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Brf2Q3UAW9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Brf2Q3UAW9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Brf2Q3UAW9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Brf2Q3UAW9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.88■□□□□ 0.93
Brf2Q3UAW9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Brf2Q3UAW9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Brf2Q3UAW9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Brf2Q3UAW9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Brf2Q3UAW9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Brf2Q3UAW9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Brf2Q3UAW9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Brf2Q3UAW9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Brf2Q3UAW9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
Brf2Q3UAW9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Brf2Q3UAW9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Brf2Q3UAW9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Brf2Q3UAW9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Brf2Q3UAW9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Brf2Q3UAW9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Brf2Q3UAW9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Brf2Q3UAW9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Brf2Q3UAW9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Brf2Q3UAW9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Brf2Q3UAW9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Brf2Q3UAW9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Brf2Q3UAW9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Brf2Q3UAW9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Brf2Q3UAW9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Brf2Q3UAW9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Brf2Q3UAW9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Brf2Q3UAW9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Brf2Q3UAW9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Brf2Q3UAW9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Brf2Q3UAW9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Brf2Q3UAW9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.84■□□□□ 0.93
Brf2Q3UAW9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Brf2Q3UAW9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.84■□□□□ 0.93
Brf2Q3UAW9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Brf2Q3UAW9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Brf2Q3UAW9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Brf2Q3UAW9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Brf2Q3UAW9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Brf2Q3UAW9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.83■□□□□ 0.93
Brf2Q3UAW9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Brf2Q3UAW9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Brf2Q3UAW9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.83■□□□□ 0.92
Brf2Q3UAW9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Brf2Q3UAW9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Brf2Q3UAW9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Brf2Q3UAW9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Brf2Q3UAW9 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.82■□□□□ 0.92
Brf2Q3UAW9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Brf2Q3UAW9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Brf2Q3UAW9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.81■□□□□ 0.92
Brf2Q3UAW9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Brf2Q3UAW9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Brf2Q3UAW9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.81■□□□□ 0.92
Brf2Q3UAW9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Brf2Q3UAW9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Brf2Q3UAW9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Brf2Q3UAW9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Brf2Q3UAW9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Brf2Q3UAW9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Brf2Q3UAW9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Brf2Q3UAW9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Brf2Q3UAW9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Brf2Q3UAW9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Brf2Q3UAW9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Brf2Q3UAW9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.78■□□□□ 0.92
Brf2Q3UAW9 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Brf2Q3UAW9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.78■□□□□ 0.92
Brf2Q3UAW9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Brf2Q3UAW9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms