Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cln6Q3U466 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cln6Q3U466 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cln6Q3U466 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cln6Q3U466 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cln6Q3U466 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.86■□□□□ 0.61
Cln6Q3U466 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.86■□□□□ 0.61
Cln6Q3U466 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cln6Q3U466 Gm37136-201ENSMUST00000194368 194 ntBASIC18.85■□□□□ 0.61
Cln6Q3U466 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.85■□□□□ 0.61
Cln6Q3U466 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cln6Q3U466 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cln6Q3U466 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cln6Q3U466 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cln6Q3U466 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Cln6Q3U466 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cln6Q3U466 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cln6Q3U466 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cln6Q3U466 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.84■□□□□ 0.61
Cln6Q3U466 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cln6Q3U466 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.84■□□□□ 0.61
Cln6Q3U466 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Cln6Q3U466 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cln6Q3U466 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.83■□□□□ 0.61
Cln6Q3U466 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cln6Q3U466 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.83■□□□□ 0.6
Cln6Q3U466 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.82■□□□□ 0.6
Cln6Q3U466 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cln6Q3U466 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cln6Q3U466 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cln6Q3U466 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cln6Q3U466 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.81■□□□□ 0.6
Cln6Q3U466 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cln6Q3U466 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cln6Q3U466 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cln6Q3U466 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cln6Q3U466 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cln6Q3U466 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cln6Q3U466 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cln6Q3U466 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cln6Q3U466 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.81■□□□□ 0.6
Cln6Q3U466 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cln6Q3U466 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cln6Q3U466 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cln6Q3U466 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cln6Q3U466 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cln6Q3U466 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cln6Q3U466 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cln6Q3U466 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.79■□□□□ 0.6
Cln6Q3U466 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cln6Q3U466 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cln6Q3U466 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cln6Q3U466 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cln6Q3U466 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cln6Q3U466 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cln6Q3U466 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cln6Q3U466 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cln6Q3U466 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cln6Q3U466 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.77■□□□□ 0.6
Cln6Q3U466 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cln6Q3U466 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cln6Q3U466 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.77■□□□□ 0.59
Cln6Q3U466 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cln6Q3U466 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cln6Q3U466 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.76■□□□□ 0.59
Cln6Q3U466 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cln6Q3U466 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cln6Q3U466 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.76■□□□□ 0.59
Cln6Q3U466 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cln6Q3U466 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.76■□□□□ 0.59
Cln6Q3U466 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cln6Q3U466 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cln6Q3U466 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cln6Q3U466 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cln6Q3U466 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Cln6Q3U466 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cln6Q3U466 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cln6Q3U466 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.75■□□□□ 0.59
Cln6Q3U466 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cln6Q3U466 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cln6Q3U466 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cln6Q3U466 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cln6Q3U466 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cln6Q3U466 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.74■□□□□ 0.59
Cln6Q3U466 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cln6Q3U466 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cln6Q3U466 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cln6Q3U466 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cln6Q3U466 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.73■□□□□ 0.59
Cln6Q3U466 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cln6Q3U466 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cln6Q3U466 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cln6Q3U466 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cln6Q3U466 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cln6Q3U466 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cln6Q3U466 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cln6Q3U466 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cln6Q3U466 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cln6Q3U466 Gm6821-201ENSMUST00000107540 542 ntBASIC18.72■□□□□ 0.59
Cln6Q3U466 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms