Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 BIM1YER016W 1035 nt6.29□□□□□ -1.4
RRP40Q08285 NTG1YAL015C 1200 nt6.29□□□□□ -1.4
RRP40Q08285 SRY1YKL218C 981 nt6.29□□□□□ -1.4
RRP40Q08285 RDN5-2RDN5-2 119 nt6.29□□□□□ -1.4
RRP40Q08285 RDN5-3RDN5-3 119 nt6.29□□□□□ -1.4
RRP40Q08285 RDN5-4RDN5-4 119 nt6.29□□□□□ -1.4
RRP40Q08285 RDN5-5RDN5-5 119 nt6.29□□□□□ -1.4
RRP40Q08285 RNH1YMR234W 1047 nt6.29□□□□□ -1.4
RRP40Q08285 ILV6YCL009C 930 nt6.29□□□□□ -1.4
RRP40Q08285 HBN1YCL026C-B 582 nt6.29□□□□□ -1.4
RRP40Q08285 TAH11YJR046W 1815 nt6.29□□□□□ -1.4
RRP40Q08285 YHR020WYHR020W 2067 nt6.29□□□□□ -1.4
RRP40Q08285 SLA2YNL243W 2907 nt6.29□□□□□ -1.4
RRP40Q08285 CYB2YML054C 1776 nt6.29□□□□□ -1.4
RRP40Q08285 HMS2YJR147W 1077 nt6.28□□□□□ -1.4
RRP40Q08285 YNL092WYNL092W 1203 nt6.28□□□□□ -1.4
RRP40Q08285 CCT3YJL014W 1605 nt6.28□□□□□ -1.4
RRP40Q08285 RGD2YFL047W 2145 nt6.28□□□□□ -1.4
RRP40Q08285 COQ1YBR003W 1422 nt6.27□□□□□ -1.41
RRP40Q08285 GCG1YER163C 699 nt6.27□□□□□ -1.41
RRP40Q08285 YFL013W-AYFL013W-A 804 nt6.27□□□□□ -1.41
RRP40Q08285 MRPL23YOR150W 492 nt6.27□□□□□ -1.41
RRP40Q08285 PPM2YOL141W 2088 nt6.26□□□□□ -1.41
RRP40Q08285 YKL153WYKL153W 510 nt6.26□□□□□ -1.41
RRP40Q08285 GPA1YHR005C 1419 nt6.25□□□□□ -1.41
RRP40Q08285 FPR2YDR519W 408 nt6.25□□□□□ -1.41
RRP40Q08285 SCS22YBL091C-A 528 nt6.25□□□□□ -1.41
RRP40Q08285 IRC11YOR013W 471 nt6.25□□□□□ -1.41
RRP40Q08285 YBR241CYBR241C 1467 nt6.25□□□□□ -1.41
RRP40Q08285 GPH1YPR160W 2709 nt6.25□□□□□ -1.41
RRP40Q08285 RBS1YDL189W 1374 nt6.24□□□□□ -1.41
RRP40Q08285 IMG1YCR046C 510 nt6.24□□□□□ -1.41
RRP40Q08285 YRB2YIL063C 984 nt6.24□□□□□ -1.41
RRP40Q08285 OM45YIL136W 1182 nt6.24□□□□□ -1.41
RRP40Q08285 YHK8YHR048W 1545 nt6.24□□□□□ -1.41
RRP40Q08285 VMA2YBR127C 1554 nt6.23□□□□□ -1.41
RRP40Q08285 YLL066CYLL066C 3618 nt6.23□□□□□ -1.41
RRP40Q08285 MIP1YOR330C 3765 nt6.23□□□□□ -1.41
RRP40Q08285 STT3YGL022W 2157 nt6.23□□□□□ -1.41
RRP40Q08285 CUE4YML101C 354 nt6.23□□□□□ -1.41
RRP40Q08285 YNR014WYNR014W 639 nt6.23□□□□□ -1.41
RRP40Q08285 GSH1YJL101C 2037 nt6.23□□□□□ -1.41
RRP40Q08285 GLN3YER040W 2193 nt6.23□□□□□ -1.41
RRP40Q08285 PAB1YER165W 1734 nt6.22□□□□□ -1.41
RRP40Q08285 COX10YPL172C 1389 nt6.22□□□□□ -1.41
RRP40Q08285 OPI7YDR360W 435 nt6.22□□□□□ -1.41
RRP40Q08285 tG(GCC)BtG(GCC)B 71 nt6.22□□□□□ -1.41
RRP40Q08285 SUF16tG(GCC)C 71 nt6.22□□□□□ -1.41
RRP40Q08285 tG(GCC)D1tG(GCC)D1 71 nt6.22□□□□□ -1.41
RRP40Q08285 tG(GCC)D2tG(GCC)D2 71 nt6.22□□□□□ -1.41
RRP40Q08285 tG(GCC)EtG(GCC)E 71 nt6.22□□□□□ -1.41
RRP40Q08285 SUF20tG(GCC)F1 71 nt6.22□□□□□ -1.41
RRP40Q08285 tG(GCC)F2tG(GCC)F2 71 nt6.22□□□□□ -1.41
RRP40Q08285 tG(GCC)G1tG(GCC)G1 71 nt6.22□□□□□ -1.41
RRP40Q08285 tG(GCC)G2tG(GCC)G2 71 nt6.22□□□□□ -1.41
RRP40Q08285 GTT3YEL017W 1014 nt6.22□□□□□ -1.41
RRP40Q08285 tG(GCC)J1tG(GCC)J1 71 nt6.22□□□□□ -1.41
RRP40Q08285 SUF23tG(GCC)J2 71 nt6.22□□□□□ -1.41
RRP40Q08285 tG(GCC)MtG(GCC)M 71 nt6.22□□□□□ -1.41
RRP40Q08285 tG(GCC)O1tG(GCC)O1 71 nt6.22□□□□□ -1.41
RRP40Q08285 SUF17tG(GCC)O2 71 nt6.22□□□□□ -1.41
RRP40Q08285 tG(GCC)P1tG(GCC)P1 71 nt6.22□□□□□ -1.41
RRP40Q08285 tG(GCC)P2tG(GCC)P2 71 nt6.22□□□□□ -1.41
RRP40Q08285 CTF8YHR191C 402 nt6.22□□□□□ -1.41
RRP40Q08285 YHR218W-AYHR218W-A 318 nt6.22□□□□□ -1.41
RRP40Q08285 YBL112CYBL112C 318 nt6.22□□□□□ -1.41
RRP40Q08285 ERG8YMR220W 1356 nt6.21□□□□□ -1.41
RRP40Q08285 ECM38YLR299W 1983 nt6.21□□□□□ -1.42
RRP40Q08285 YHR213W-BYHR213W-B 300 nt6.21□□□□□ -1.42
RRP40Q08285 MHT1YLL062C 975 nt6.21□□□□□ -1.42
RRP40Q08285 YAR064WYAR064W 300 nt6.21□□□□□ -1.42
RRP40Q08285 TSR2YLR435W 618 nt6.21□□□□□ -1.42
RRP40Q08285 DFR1YOR236W 636 nt6.21□□□□□ -1.42
RRP40Q08285 ERP2YAL007C 648 nt6.2□□□□□ -1.42
RRP40Q08285 ATG36YJL185C 882 nt6.2□□□□□ -1.42
RRP40Q08285 YKR045CYKR045C 552 nt6.2□□□□□ -1.42
RRP40Q08285 BDF2YDL070W 1917 nt6.2□□□□□ -1.42
RRP40Q08285 NOG2YNR053C 1461 nt6.2□□□□□ -1.42
RRP40Q08285 GPD2YOL059W 1323 nt6.2□□□□□ -1.42
RRP40Q08285 PPH22YDL188C 1134 nt6.19□□□□□ -1.42
RRP40Q08285 MGM101YJR144W 810 nt6.19□□□□□ -1.42
RRP40Q08285 GCN3YKR026C 918 nt6.19□□□□□ -1.42
RRP40Q08285 DID2YKR035W-A 615 nt6.19□□□□□ -1.42
RRP40Q08285 YMR252CYMR252C 405 nt6.19□□□□□ -1.42
RRP40Q08285 RFC4YOL094C 972 nt6.19□□□□□ -1.42
RRP40Q08285 OPI11YPR044C 354 nt6.19□□□□□ -1.42
RRP40Q08285 DPH5YLR172C 903 nt6.18□□□□□ -1.42
RRP40Q08285 YLR361C-AYLR361C-A 297 nt6.18□□□□□ -1.42
RRP40Q08285 YPL257WYPL257W 582 nt6.18□□□□□ -1.42
RRP40Q08285 PEX31YGR004W 1389 nt6.18□□□□□ -1.42
RRP40Q08285 TKL2YBR117C 2046 nt6.17□□□□□ -1.42
RRP40Q08285 FAL1YDR021W 1200 nt6.17□□□□□ -1.42
RRP40Q08285 HIS1YER055C 894 nt6.17□□□□□ -1.42
RRP40Q08285 HSP12YFL014W 330 nt6.17□□□□□ -1.42
RRP40Q08285 COX16YJL003W 357 nt6.17□□□□□ -1.42
RRP40Q08285 MDH1YKL085W 1005 nt6.17□□□□□ -1.42
RRP40Q08285 ARP3YJR065C 1350 nt6.17□□□□□ -1.42
RRP40Q08285 RGT2YDL138W 2292 nt6.16□□□□□ -1.42
RRP40Q08285 CCT8YJL008C 1707 nt6.16□□□□□ -1.42
RRP40Q08285 YJR146WYJR146W 354 nt6.16□□□□□ -1.42
Retrieved 100 of 7,029 protein–RNA pairs in 130.9 ms