Protein–RNA interactions for Protein: P51944

Ccnf, Cyclin-F, mousemouse

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnfP51944 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.33■■□□□ 1.01
CcnfP51944 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CcnfP51944 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.33■■□□□ 1
CcnfP51944 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CcnfP51944 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CcnfP51944 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CcnfP51944 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CcnfP51944 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CcnfP51944 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CcnfP51944 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CcnfP51944 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CcnfP51944 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.31■■□□□ 1
CcnfP51944 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CcnfP51944 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
CcnfP51944 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.3■■□□□ 1
CcnfP51944 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.3■■□□□ 1
CcnfP51944 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CcnfP51944 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.3■■□□□ 1
CcnfP51944 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.3■■□□□ 1
CcnfP51944 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CcnfP51944 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CcnfP51944 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CcnfP51944 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CcnfP51944 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CcnfP51944 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CcnfP51944 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CcnfP51944 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CcnfP51944 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CcnfP51944 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CcnfP51944 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
CcnfP51944 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CcnfP51944 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CcnfP51944 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
CcnfP51944 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
CcnfP51944 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CcnfP51944 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CcnfP51944 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
CcnfP51944 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CcnfP51944 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CcnfP51944 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.25■□□□□ 0.99
CcnfP51944 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CcnfP51944 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CcnfP51944 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CcnfP51944 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CcnfP51944 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.23■□□□□ 0.99
CcnfP51944 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CcnfP51944 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
CcnfP51944 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CcnfP51944 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CcnfP51944 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CcnfP51944 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CcnfP51944 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CcnfP51944 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CcnfP51944 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CcnfP51944 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CcnfP51944 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CcnfP51944 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CcnfP51944 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CcnfP51944 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CcnfP51944 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.2■□□□□ 0.98
CcnfP51944 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CcnfP51944 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CcnfP51944 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CcnfP51944 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CcnfP51944 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.19■□□□□ 0.98
CcnfP51944 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.19■□□□□ 0.98
CcnfP51944 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
CcnfP51944 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CcnfP51944 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CcnfP51944 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CcnfP51944 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.17■□□□□ 0.98
CcnfP51944 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CcnfP51944 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CcnfP51944 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CcnfP51944 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CcnfP51944 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.17■□□□□ 0.98
CcnfP51944 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CcnfP51944 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CcnfP51944 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CcnfP51944 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.16■□□□□ 0.98
CcnfP51944 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CcnfP51944 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CcnfP51944 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CcnfP51944 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CcnfP51944 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CcnfP51944 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CcnfP51944 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CcnfP51944 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CcnfP51944 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CcnfP51944 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CcnfP51944 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CcnfP51944 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CcnfP51944 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CcnfP51944 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CcnfP51944 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CcnfP51944 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CcnfP51944 Nkain2-201ENSMUST00000092602 558 ntBASIC21.13■□□□□ 0.97
CcnfP51944 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.13■□□□□ 0.97
CcnfP51944 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CcnfP51944 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms