Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Upk2P38575 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Upk2P38575 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Upk2P38575 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.59■□□□□ 0.73
Upk2P38575 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Upk2P38575 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Upk2P38575 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.59■□□□□ 0.73
Upk2P38575 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Upk2P38575 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.58■□□□□ 0.73
Upk2P38575 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.58■□□□□ 0.73
Upk2P38575 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Upk2P38575 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Upk2P38575 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Upk2P38575 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.58■□□□□ 0.72
Upk2P38575 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.58■□□□□ 0.72
Upk2P38575 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Upk2P38575 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Upk2P38575 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Upk2P38575 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.57■□□□□ 0.72
Upk2P38575 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Upk2P38575 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Upk2P38575 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.56■□□□□ 0.72
Upk2P38575 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Upk2P38575 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Upk2P38575 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Upk2P38575 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Upk2P38575 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Upk2P38575 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Upk2P38575 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Upk2P38575 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Upk2P38575 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Upk2P38575 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.55■□□□□ 0.72
Upk2P38575 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Upk2P38575 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Upk2P38575 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Upk2P38575 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Upk2P38575 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Upk2P38575 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.54■□□□□ 0.72
Upk2P38575 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.54■□□□□ 0.72
Upk2P38575 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Upk2P38575 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Upk2P38575 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.54■□□□□ 0.72
Upk2P38575 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Upk2P38575 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Upk2P38575 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Upk2P38575 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Upk2P38575 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Upk2P38575 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Upk2P38575 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Upk2P38575 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.52■□□□□ 0.72
Upk2P38575 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Upk2P38575 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Upk2P38575 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Upk2P38575 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Upk2P38575 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
Upk2P38575 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Upk2P38575 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.51■□□□□ 0.71
Upk2P38575 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Upk2P38575 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Upk2P38575 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Upk2P38575 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Upk2P38575 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Upk2P38575 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Upk2P38575 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.5■□□□□ 0.71
Upk2P38575 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Upk2P38575 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Upk2P38575 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Upk2P38575 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Upk2P38575 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Upk2P38575 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Upk2P38575 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Upk2P38575 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Upk2P38575 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Upk2P38575 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Upk2P38575 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Upk2P38575 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.48■□□□□ 0.71
Upk2P38575 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.48■□□□□ 0.71
Upk2P38575 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Upk2P38575 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Upk2P38575 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Upk2P38575 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Upk2P38575 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.47■□□□□ 0.71
Upk2P38575 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Upk2P38575 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Upk2P38575 Scarna2-201ENSMUST00000157560 414 ntBASIC19.47■□□□□ 0.71
Upk2P38575 Gm9806-201ENSMUST00000051080 552 ntBASIC19.47■□□□□ 0.71
Upk2P38575 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Upk2P38575 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Upk2P38575 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Upk2P38575 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.46■□□□□ 0.71
Upk2P38575 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Upk2P38575 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Upk2P38575 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.45■□□□□ 0.7
Upk2P38575 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Upk2P38575 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Upk2P38575 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Upk2P38575 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Upk2P38575 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Upk2P38575 Gm44428-201ENSMUST00000204474 874 ntBASIC19.44■□□□□ 0.7
Upk2P38575 Gm16437-201ENSMUST00000025669 507 ntBASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms