Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Tnfrsf1aP25118 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfrsf1aP25118 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.58■□□□□ 0.56
Tnfrsf1aP25118 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfrsf1aP25118 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Tnfrsf1aP25118 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfrsf1aP25118 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfrsf1aP25118 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.57■□□□□ 0.56
Tnfrsf1aP25118 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf1aP25118 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf1aP25118 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf1aP25118 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Tnfrsf1aP25118 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
Tnfrsf1aP25118 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf1aP25118 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Tnfrsf1aP25118 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf1aP25118 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf1aP25118 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf1aP25118 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Tnfrsf1aP25118 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.55■□□□□ 0.56
Tnfrsf1aP25118 Gm9812-201ENSMUST00000061934 968 ntBASIC18.55■□□□□ 0.56
Tnfrsf1aP25118 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.55■□□□□ 0.56
Tnfrsf1aP25118 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf1aP25118 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf1aP25118 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf1aP25118 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf1aP25118 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf1aP25118 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Tnfrsf1aP25118 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf1aP25118 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.53■□□□□ 0.56
Tnfrsf1aP25118 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf1aP25118 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.53■□□□□ 0.56
Tnfrsf1aP25118 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf1aP25118 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf1aP25118 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.53■□□□□ 0.56
Tnfrsf1aP25118 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf1aP25118 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf1aP25118 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf1aP25118 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf1aP25118 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf1aP25118 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf1aP25118 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.52■□□□□ 0.56
Tnfrsf1aP25118 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf1aP25118 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf1aP25118 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf1aP25118 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.51■□□□□ 0.55
Tnfrsf1aP25118 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf1aP25118 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Tnfrsf1aP25118 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.5■□□□□ 0.55
Tnfrsf1aP25118 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf1aP25118 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf1aP25118 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf1aP25118 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf1aP25118 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
Tnfrsf1aP25118 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf1aP25118 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.5■□□□□ 0.55
Tnfrsf1aP25118 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf1aP25118 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Tnfrsf1aP25118 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf1aP25118 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf1aP25118 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Tnfrsf1aP25118 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.49■□□□□ 0.55
Tnfrsf1aP25118 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfrsf1aP25118 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.48■□□□□ 0.55
Tnfrsf1aP25118 Gm45364-201ENSMUST00000210883 159 ntBASIC18.48■□□□□ 0.55
Tnfrsf1aP25118 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.48■□□□□ 0.55
Tnfrsf1aP25118 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfrsf1aP25118 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfrsf1aP25118 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Tnfrsf1aP25118 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.47■□□□□ 0.55
Tnfrsf1aP25118 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfrsf1aP25118 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfrsf1aP25118 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfrsf1aP25118 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfrsf1aP25118 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Tnfrsf1aP25118 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.46■□□□□ 0.55
Tnfrsf1aP25118 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfrsf1aP25118 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfrsf1aP25118 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfrsf1aP25118 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfrsf1aP25118 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Tnfrsf1aP25118 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Tnfrsf1aP25118 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Tnfrsf1aP25118 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf1aP25118 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf1aP25118 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Tnfrsf1aP25118 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.45■□□□□ 0.54
Tnfrsf1aP25118 Terc-201ENSMUST00000082862 423 ntBASIC18.45■□□□□ 0.54
Tnfrsf1aP25118 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf1aP25118 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf1aP25118 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf1aP25118 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf1aP25118 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.44■□□□□ 0.54
Tnfrsf1aP25118 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf1aP25118 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf1aP25118 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Tnfrsf1aP25118 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.43■□□□□ 0.54
Tnfrsf1aP25118 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Tnfrsf1aP25118 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.43■□□□□ 0.54
Tnfrsf1aP25118 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms