Protein–RNA interactions for Protein: P16546

Sptan1, Spectrin alpha chain, non-erythrocytic 1, mousemouse

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptan1P16546 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Sptan1P16546 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.5■□□□□ 0.71
Sptan1P16546 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sptan1P16546 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sptan1P16546 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sptan1P16546 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sptan1P16546 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sptan1P16546 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.5■□□□□ 0.71
Sptan1P16546 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sptan1P16546 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sptan1P16546 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Sptan1P16546 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.49■□□□□ 0.71
Sptan1P16546 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Sptan1P16546 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sptan1P16546 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sptan1P16546 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.48■□□□□ 0.71
Sptan1P16546 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.48■□□□□ 0.71
Sptan1P16546 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sptan1P16546 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sptan1P16546 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sptan1P16546 Gm9847-201ENSMUST00000052528 599 ntBASIC19.48■□□□□ 0.71
Sptan1P16546 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Sptan1P16546 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sptan1P16546 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Sptan1P16546 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sptan1P16546 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sptan1P16546 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sptan1P16546 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sptan1P16546 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sptan1P16546 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sptan1P16546 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sptan1P16546 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sptan1P16546 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.45■□□□□ 0.7
Sptan1P16546 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sptan1P16546 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sptan1P16546 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sptan1P16546 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.44■□□□□ 0.7
Sptan1P16546 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.44■□□□□ 0.7
Sptan1P16546 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.44■□□□□ 0.7
Sptan1P16546 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.44■□□□□ 0.7
Sptan1P16546 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sptan1P16546 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.43■□□□□ 0.7
Sptan1P16546 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Sptan1P16546 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.43■□□□□ 0.7
Sptan1P16546 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sptan1P16546 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sptan1P16546 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.43■□□□□ 0.7
Sptan1P16546 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sptan1P16546 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sptan1P16546 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sptan1P16546 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sptan1P16546 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sptan1P16546 Gm7417-201ENSMUST00000192950 473 ntBASIC19.41■□□□□ 0.7
Sptan1P16546 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sptan1P16546 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sptan1P16546 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sptan1P16546 Gm12922-201ENSMUST00000120626 809 ntBASIC19.41■□□□□ 0.7
Sptan1P16546 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Sptan1P16546 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sptan1P16546 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sptan1P16546 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.4■□□□□ 0.7
Sptan1P16546 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Sptan1P16546 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Sptan1P16546 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sptan1P16546 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sptan1P16546 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Sptan1P16546 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.39■□□□□ 0.69
Sptan1P16546 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.39■□□□□ 0.69
Sptan1P16546 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sptan1P16546 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sptan1P16546 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sptan1P16546 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sptan1P16546 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.37■□□□□ 0.69
Sptan1P16546 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sptan1P16546 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sptan1P16546 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.37■□□□□ 0.69
Sptan1P16546 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.37■□□□□ 0.69
Sptan1P16546 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sptan1P16546 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Sptan1P16546 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sptan1P16546 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Sptan1P16546 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Sptan1P16546 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.34■□□□□ 0.69
Sptan1P16546 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.34■□□□□ 0.69
Sptan1P16546 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sptan1P16546 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sptan1P16546 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Sptan1P16546 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.34■□□□□ 0.69
Sptan1P16546 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sptan1P16546 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sptan1P16546 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sptan1P16546 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sptan1P16546 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sptan1P16546 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sptan1P16546 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sptan1P16546 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sptan1P16546 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
Sptan1P16546 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sptan1P16546 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Sptan1P16546 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms