Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Sod1P08228 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sod1P08228 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.46■■□□□ 1.03
Sod1P08228 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sod1P08228 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Sod1P08228 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.46■■□□□ 1.03
Sod1P08228 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sod1P08228 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Sod1P08228 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.45■■□□□ 1.02
Sod1P08228 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sod1P08228 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Sod1P08228 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sod1P08228 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sod1P08228 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sod1P08228 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Sod1P08228 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.45■■□□□ 1.02
Sod1P08228 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Sod1P08228 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Sod1P08228 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Sod1P08228 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.44■■□□□ 1.02
Sod1P08228 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sod1P08228 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.43■■□□□ 1.02
Sod1P08228 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sod1P08228 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sod1P08228 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sod1P08228 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Sod1P08228 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.43■■□□□ 1.02
Sod1P08228 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.43■■□□□ 1.02
Sod1P08228 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sod1P08228 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sod1P08228 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sod1P08228 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sod1P08228 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Sod1P08228 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Sod1P08228 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sod1P08228 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sod1P08228 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sod1P08228 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sod1P08228 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sod1P08228 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sod1P08228 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sod1P08228 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.41■■□□□ 1.02
Sod1P08228 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Sod1P08228 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.4■■□□□ 1.02
Sod1P08228 Rps24-207ENSMUST00000224568 714 ntBASIC21.4■■□□□ 1.02
Sod1P08228 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sod1P08228 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Sod1P08228 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Sod1P08228 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Sod1P08228 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Sod1P08228 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Sod1P08228 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Sod1P08228 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.37■■□□□ 1.01
Sod1P08228 Gm45102-201ENSMUST00000207427 857 ntBASIC21.37■■□□□ 1.01
Sod1P08228 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sod1P08228 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sod1P08228 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Sod1P08228 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sod1P08228 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sod1P08228 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sod1P08228 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sod1P08228 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.35■■□□□ 1.01
Sod1P08228 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.35■■□□□ 1.01
Sod1P08228 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sod1P08228 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Sod1P08228 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Sod1P08228 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.34■■□□□ 1.01
Sod1P08228 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sod1P08228 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sod1P08228 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sod1P08228 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sod1P08228 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sod1P08228 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Sod1P08228 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sod1P08228 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.33■■□□□ 1
Sod1P08228 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Sod1P08228 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Sod1P08228 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Sod1P08228 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.32■■□□□ 1
Sod1P08228 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Sod1P08228 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.32■■□□□ 1
Sod1P08228 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sod1P08228 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sod1P08228 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sod1P08228 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sod1P08228 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sod1P08228 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sod1P08228 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sod1P08228 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sod1P08228 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sod1P08228 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sod1P08228 Gm14117-201ENSMUST00000122417 843 ntBASIC21.3■■□□□ 1
Sod1P08228 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.3■■□□□ 1
Sod1P08228 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.3■■□□□ 1
Sod1P08228 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sod1P08228 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sod1P08228 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sod1P08228 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sod1P08228 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.29■■□□□ 1
Sod1P08228 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms