Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ercc1P07903 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Ercc1P07903 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ercc1P07903 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ercc1P07903 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ercc1P07903 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ercc1P07903 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ercc1P07903 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ercc1P07903 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ercc1P07903 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ercc1P07903 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ercc1P07903 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ercc1P07903 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ercc1P07903 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.59■□□□□ 0.57
Ercc1P07903 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ercc1P07903 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.59■□□□□ 0.57
Ercc1P07903 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.59■□□□□ 0.57
Ercc1P07903 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ercc1P07903 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Ercc1P07903 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Ercc1P07903 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Ercc1P07903 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ercc1P07903 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Ercc1P07903 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.58■□□□□ 0.57
Ercc1P07903 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ercc1P07903 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ercc1P07903 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ercc1P07903 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Ercc1P07903 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.58■□□□□ 0.56
Ercc1P07903 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ercc1P07903 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ercc1P07903 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ercc1P07903 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ercc1P07903 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ercc1P07903 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ercc1P07903 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ercc1P07903 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ercc1P07903 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ercc1P07903 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ercc1P07903 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ercc1P07903 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ercc1P07903 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ercc1P07903 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ercc1P07903 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ercc1P07903 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ercc1P07903 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Ercc1P07903 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ercc1P07903 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ercc1P07903 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ercc1P07903 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.55■□□□□ 0.56
Ercc1P07903 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ercc1P07903 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ercc1P07903 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ercc1P07903 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ercc1P07903 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ercc1P07903 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ercc1P07903 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.53■□□□□ 0.56
Ercc1P07903 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.53■□□□□ 0.56
Ercc1P07903 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ercc1P07903 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.53■□□□□ 0.56
Ercc1P07903 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ercc1P07903 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ercc1P07903 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ercc1P07903 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ercc1P07903 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ercc1P07903 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Ercc1P07903 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ercc1P07903 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ercc1P07903 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ercc1P07903 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ercc1P07903 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ercc1P07903 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ercc1P07903 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ercc1P07903 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.51■□□□□ 0.55
Ercc1P07903 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ercc1P07903 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ercc1P07903 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ercc1P07903 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ercc1P07903 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ercc1P07903 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ercc1P07903 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ercc1P07903 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ercc1P07903 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ercc1P07903 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.49■□□□□ 0.55
Ercc1P07903 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ercc1P07903 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ercc1P07903 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ercc1P07903 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ercc1P07903 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ercc1P07903 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ercc1P07903 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ercc1P07903 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ercc1P07903 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ercc1P07903 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ercc1P07903 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ercc1P07903 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ercc1P07903 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ercc1P07903 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Ercc1P07903 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ercc1P07903 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms