Protein–RNA interactions for Protein: P01739

T-cell receptor alpha chain V region 2B4, mousemouse

Predictions only

Length 132 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01739 AC122317.2-201ENSMUST00000218708 1248 ntBASIC16.7■□□□□ 0.26
P01739 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.7■□□□□ 0.26
P01739 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P01739 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
P01739 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
P01739 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
P01739 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
P01739 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.7■□□□□ 0.26
P01739 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
P01739 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P01739 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P01739 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
P01739 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
P01739 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.69■□□□□ 0.26
P01739 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.69■□□□□ 0.26
P01739 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P01739 Gm45364-201ENSMUST00000210883 159 ntBASIC16.68■□□□□ 0.26
P01739 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P01739 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P01739 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.68■□□□□ 0.26
P01739 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC16.68■□□□□ 0.26
P01739 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P01739 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
P01739 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
P01739 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
P01739 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
P01739 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
P01739 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC16.66■□□□□ 0.26
P01739 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
P01739 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
P01739 AC164433.2-201ENSMUST00000226346 1701 ntBASIC16.66■□□□□ 0.26
P01739 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
P01739 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
P01739 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
P01739 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P01739 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
P01739 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
P01739 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P01739 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
P01739 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC16.65■□□□□ 0.26
P01739 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
P01739 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.26
P01739 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
P01739 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.26
P01739 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01739 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
P01739 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC16.64■□□□□ 0.25
P01739 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01739 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01739 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
P01739 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.63■□□□□ 0.25
P01739 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01739 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01739 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
P01739 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC16.63■□□□□ 0.25
P01739 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P01739 AC167019.3-201ENSMUST00000228225 1266 ntBASIC16.63■□□□□ 0.25
P01739 Terc-201ENSMUST00000082862 423 ntBASIC16.63■□□□□ 0.25
P01739 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01739 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
P01739 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P01739 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P01739 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01739 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01739 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01739 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01739 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
P01739 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01739 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01739 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01739 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
P01739 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01739 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
P01739 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
P01739 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01739 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P01739 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P01739 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P01739 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
P01739 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC16.6■□□□□ 0.25
P01739 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P01739 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
P01739 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P01739 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
P01739 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
P01739 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.59■□□□□ 0.25
P01739 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
P01739 Gm6934-201ENSMUST00000194780 1905 ntBASIC16.58■□□□□ 0.25
P01739 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.58■□□□□ 0.25
P01739 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
P01739 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
P01739 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
P01739 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
P01739 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC16.58■□□□□ 0.24
P01739 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P01739 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
P01739 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P01739 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
P01739 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P01739 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms