Protein–RNA interactions for Protein: P00416

mt-Co3, Cytochrome c oxidase subunit 3, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
mt-Co3P00416 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
mt-Co3P00416 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
mt-Co3P00416 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
mt-Co3P00416 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC23.4■■□□□ 1.34
mt-Co3P00416 Gm13241-201ENSMUST00000094493 780 ntBASIC23.4■■□□□ 1.34
mt-Co3P00416 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
mt-Co3P00416 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
mt-Co3P00416 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC23.39■■□□□ 1.33
mt-Co3P00416 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
mt-Co3P00416 Zxda-201ENSMUST00000117281 2621 ntBASIC23.39■■□□□ 1.33
mt-Co3P00416 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
mt-Co3P00416 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
mt-Co3P00416 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
mt-Co3P00416 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC23.38■■□□□ 1.33
mt-Co3P00416 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
mt-Co3P00416 Gm5131-201ENSMUST00000212776 1238 ntBASIC23.38■■□□□ 1.33
mt-Co3P00416 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.38■■□□□ 1.33
mt-Co3P00416 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
mt-Co3P00416 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.37■■□□□ 1.33
mt-Co3P00416 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC23.37■■□□□ 1.33
mt-Co3P00416 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
mt-Co3P00416 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
mt-Co3P00416 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
mt-Co3P00416 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
mt-Co3P00416 Gm43034-201ENSMUST00000198678 1364 ntBASIC23.36■■□□□ 1.33
mt-Co3P00416 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
mt-Co3P00416 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
mt-Co3P00416 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
mt-Co3P00416 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
mt-Co3P00416 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.33■■□□□ 1.33
mt-Co3P00416 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
mt-Co3P00416 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
mt-Co3P00416 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.32■■□□□ 1.32
mt-Co3P00416 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
mt-Co3P00416 Gm7417-201ENSMUST00000192950 473 ntBASIC23.32■■□□□ 1.32
mt-Co3P00416 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
mt-Co3P00416 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
mt-Co3P00416 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
mt-Co3P00416 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC23.31■■□□□ 1.32
mt-Co3P00416 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC23.31■■□□□ 1.32
mt-Co3P00416 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
mt-Co3P00416 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC23.3■■□□□ 1.32
mt-Co3P00416 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
mt-Co3P00416 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
mt-Co3P00416 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
mt-Co3P00416 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
mt-Co3P00416 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
mt-Co3P00416 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
mt-Co3P00416 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
mt-Co3P00416 Gm5297-201ENSMUST00000198555 1171 ntBASIC23.29■■□□□ 1.32
mt-Co3P00416 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
mt-Co3P00416 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
mt-Co3P00416 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
mt-Co3P00416 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
mt-Co3P00416 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
mt-Co3P00416 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
mt-Co3P00416 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
mt-Co3P00416 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC23.27■■□□□ 1.32
mt-Co3P00416 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC23.27■■□□□ 1.32
mt-Co3P00416 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
mt-Co3P00416 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.27■■□□□ 1.32
mt-Co3P00416 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
mt-Co3P00416 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
mt-Co3P00416 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
mt-Co3P00416 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
mt-Co3P00416 Gm9847-201ENSMUST00000052528 599 ntBASIC23.26■■□□□ 1.31
mt-Co3P00416 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
mt-Co3P00416 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
mt-Co3P00416 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
mt-Co3P00416 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
mt-Co3P00416 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
mt-Co3P00416 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
mt-Co3P00416 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC23.25■■□□□ 1.31
mt-Co3P00416 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
mt-Co3P00416 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
mt-Co3P00416 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
mt-Co3P00416 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
mt-Co3P00416 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.23■■□□□ 1.31
mt-Co3P00416 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
mt-Co3P00416 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC23.22■■□□□ 1.31
mt-Co3P00416 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
mt-Co3P00416 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
mt-Co3P00416 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
mt-Co3P00416 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
mt-Co3P00416 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
mt-Co3P00416 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC23.21■■□□□ 1.31
mt-Co3P00416 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
mt-Co3P00416 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
mt-Co3P00416 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
mt-Co3P00416 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC23.2■■□□□ 1.3
mt-Co3P00416 Gm21956-201ENSMUST00000179946 522 ntBASIC23.2■■□□□ 1.3
mt-Co3P00416 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
mt-Co3P00416 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
mt-Co3P00416 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
mt-Co3P00416 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
mt-Co3P00416 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC23.19■■□□□ 1.3
mt-Co3P00416 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
mt-Co3P00416 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
mt-Co3P00416 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
mt-Co3P00416 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms