Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Dkk1O54908 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Dkk1O54908 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Dkk1O54908 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Dkk1O54908 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dkk1O54908 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dkk1O54908 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.21■□□□□ 0.67
Dkk1O54908 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Dkk1O54908 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dkk1O54908 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dkk1O54908 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.21■□□□□ 0.67
Dkk1O54908 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.21■□□□□ 0.67
Dkk1O54908 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dkk1O54908 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Dkk1O54908 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dkk1O54908 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dkk1O54908 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Dkk1O54908 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Dkk1O54908 Gm44428-201ENSMUST00000204474 874 ntBASIC19.2■□□□□ 0.66
Dkk1O54908 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.2■□□□□ 0.66
Dkk1O54908 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Dkk1O54908 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Dkk1O54908 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Dkk1O54908 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Dkk1O54908 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Dkk1O54908 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Dkk1O54908 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Dkk1O54908 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Dkk1O54908 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Dkk1O54908 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Dkk1O54908 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Dkk1O54908 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Dkk1O54908 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Dkk1O54908 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Dkk1O54908 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dkk1O54908 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dkk1O54908 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dkk1O54908 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dkk1O54908 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.16■□□□□ 0.66
Dkk1O54908 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dkk1O54908 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Dkk1O54908 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dkk1O54908 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Dkk1O54908 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Dkk1O54908 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Dkk1O54908 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Dkk1O54908 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Dkk1O54908 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.14■□□□□ 0.65
Dkk1O54908 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Dkk1O54908 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Dkk1O54908 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Dkk1O54908 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.14■□□□□ 0.65
Dkk1O54908 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Dkk1O54908 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dkk1O54908 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dkk1O54908 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC19.13■□□□□ 0.65
Dkk1O54908 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Dkk1O54908 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dkk1O54908 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dkk1O54908 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dkk1O54908 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Dkk1O54908 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Dkk1O54908 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Dkk1O54908 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Dkk1O54908 Gm27502-201ENSMUST00000183495 199 ntBASIC19.11■□□□□ 0.65
Dkk1O54908 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.11■□□□□ 0.65
Dkk1O54908 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Dkk1O54908 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dkk1O54908 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Dkk1O54908 AC158982.1-201ENSMUST00000228377 901 ntBASIC19.1■□□□□ 0.65
Dkk1O54908 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dkk1O54908 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.1■□□□□ 0.65
Dkk1O54908 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Dkk1O54908 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.09■□□□□ 0.65
Dkk1O54908 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Dkk1O54908 Gm14523-201ENSMUST00000117260 558 ntBASIC19.09■□□□□ 0.65
Dkk1O54908 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Dkk1O54908 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Dkk1O54908 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Dkk1O54908 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Dkk1O54908 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.08■□□□□ 0.64
Dkk1O54908 Gm12366-201ENSMUST00000121722 873 ntBASIC19.08■□□□□ 0.64
Dkk1O54908 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.08■□□□□ 0.64
Dkk1O54908 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.08■□□□□ 0.64
Dkk1O54908 Gm5786-201ENSMUST00000085368 882 ntBASIC19.08■□□□□ 0.64
Dkk1O54908 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Dkk1O54908 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Dkk1O54908 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Dkk1O54908 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Dkk1O54908 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Dkk1O54908 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Dkk1O54908 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.07■□□□□ 0.64
Dkk1O54908 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.07■□□□□ 0.64
Dkk1O54908 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Dkk1O54908 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Dkk1O54908 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Dkk1O54908 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Dkk1O54908 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Dkk1O54908 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Dkk1O54908 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms