Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Gm3139J3QK78 Gm10420-201ENSMUST00000121713 882 ntBASIC22.36■■□□□ 1.17
Gm3139J3QK78 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.36■■□□□ 1.17
Gm3139J3QK78 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Gm3139J3QK78 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Gm3139J3QK78 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Gm3139J3QK78 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Gm3139J3QK78 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Gm3139J3QK78 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Gm3139J3QK78 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Gm3139J3QK78 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Gm3139J3QK78 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Gm3139J3QK78 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Gm3139J3QK78 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Gm3139J3QK78 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Gm3139J3QK78 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Gm3139J3QK78 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Gm3139J3QK78 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Gm3139J3QK78 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.32■■□□□ 1.16
Gm3139J3QK78 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gm3139J3QK78 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.32■■□□□ 1.16
Gm3139J3QK78 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gm3139J3QK78 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm3139J3QK78 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm3139J3QK78 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm3139J3QK78 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm3139J3QK78 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm3139J3QK78 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Gm3139J3QK78 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Gm3139J3QK78 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Gm3139J3QK78 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gm3139J3QK78 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22.29■■□□□ 1.16
Gm3139J3QK78 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Gm3139J3QK78 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.28■■□□□ 1.16
Gm3139J3QK78 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm3139J3QK78 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm3139J3QK78 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gm3139J3QK78 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Gm3139J3QK78 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Gm3139J3QK78 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gm3139J3QK78 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Gm3139J3QK78 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Gm3139J3QK78 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gm3139J3QK78 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gm3139J3QK78 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gm3139J3QK78 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gm3139J3QK78 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gm3139J3QK78 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Gm3139J3QK78 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Gm3139J3QK78 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Gm3139J3QK78 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm3139J3QK78 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm3139J3QK78 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm3139J3QK78 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm3139J3QK78 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Gm3139J3QK78 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC22.23■■□□□ 1.15
Gm3139J3QK78 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Gm3139J3QK78 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Gm3139J3QK78 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.22■■□□□ 1.15
Gm3139J3QK78 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Gm3139J3QK78 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Gm3139J3QK78 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.22■■□□□ 1.15
Gm3139J3QK78 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Gm3139J3QK78 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Gm3139J3QK78 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Gm3139J3QK78 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Gm3139J3QK78 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Gm3139J3QK78 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Gm3139J3QK78 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.21■■□□□ 1.15
Gm3139J3QK78 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Gm3139J3QK78 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Gm3139J3QK78 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
Gm3139J3QK78 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Gm3139J3QK78 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Gm3139J3QK78 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Gm3139J3QK78 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Gm3139J3QK78 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Gm3139J3QK78 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Gm3139J3QK78 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Gm3139J3QK78 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Gm3139J3QK78 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Gm3139J3QK78 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Gm3139J3QK78 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.19■■□□□ 1.14
Gm3139J3QK78 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Gm3139J3QK78 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Gm3139J3QK78 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Gm3139J3QK78 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Gm3139J3QK78 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Gm3139J3QK78 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Gm3139J3QK78 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Gm3139J3QK78 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Gm3139J3QK78 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Gm3139J3QK78 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Gm3139J3QK78 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Gm3139J3QK78 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.17■■□□□ 1.14
Gm3139J3QK78 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Gm3139J3QK78 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Gm3139J3QK78 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Gm3139J3QK78 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Gm3139J3QK78 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms