Protein–RNA interactions for Protein: E9PXX9

Slc28a1, Sodium/nucleoside cotransporter, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a1E9PXX9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Slc28a1E9PXX9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc28a1E9PXX9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc28a1E9PXX9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc28a1E9PXX9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.03■□□□□ 0.96
Slc28a1E9PXX9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc28a1E9PXX9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
Slc28a1E9PXX9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Slc28a1E9PXX9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Slc28a1E9PXX9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc28a1E9PXX9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slc28a1E9PXX9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Slc28a1E9PXX9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21■□□□□ 0.95
Slc28a1E9PXX9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
Slc28a1E9PXX9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21■□□□□ 0.95
Slc28a1E9PXX9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slc28a1E9PXX9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Slc28a1E9PXX9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.99■□□□□ 0.95
Slc28a1E9PXX9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
Slc28a1E9PXX9 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.99■□□□□ 0.95
Slc28a1E9PXX9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
Slc28a1E9PXX9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc28a1E9PXX9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Slc28a1E9PXX9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc28a1E9PXX9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Slc28a1E9PXX9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc28a1E9PXX9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc28a1E9PXX9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc28a1E9PXX9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc28a1E9PXX9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc28a1E9PXX9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Slc28a1E9PXX9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Slc28a1E9PXX9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc28a1E9PXX9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc28a1E9PXX9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc28a1E9PXX9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc28a1E9PXX9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc28a1E9PXX9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Slc28a1E9PXX9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc28a1E9PXX9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc28a1E9PXX9 Gm37136-201ENSMUST00000194368 194 ntBASIC20.96■□□□□ 0.95
Slc28a1E9PXX9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc28a1E9PXX9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Slc28a1E9PXX9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc28a1E9PXX9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc28a1E9PXX9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Slc28a1E9PXX9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Slc28a1E9PXX9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Slc28a1E9PXX9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc28a1E9PXX9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Slc28a1E9PXX9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc28a1E9PXX9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Slc28a1E9PXX9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc28a1E9PXX9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Slc28a1E9PXX9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.94■□□□□ 0.94
Slc28a1E9PXX9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc28a1E9PXX9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc28a1E9PXX9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.93■□□□□ 0.94
Slc28a1E9PXX9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc28a1E9PXX9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc28a1E9PXX9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc28a1E9PXX9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc28a1E9PXX9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Slc28a1E9PXX9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.92■□□□□ 0.94
Slc28a1E9PXX9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Slc28a1E9PXX9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.9■□□□□ 0.94
Slc28a1E9PXX9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.9■□□□□ 0.94
Slc28a1E9PXX9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc28a1E9PXX9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Slc28a1E9PXX9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc28a1E9PXX9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Slc28a1E9PXX9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Slc28a1E9PXX9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.89■□□□□ 0.93
Slc28a1E9PXX9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc28a1E9PXX9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc28a1E9PXX9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Slc28a1E9PXX9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc28a1E9PXX9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc28a1E9PXX9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc28a1E9PXX9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc28a1E9PXX9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Slc28a1E9PXX9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc28a1E9PXX9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc28a1E9PXX9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc28a1E9PXX9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc28a1E9PXX9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc28a1E9PXX9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Slc28a1E9PXX9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc28a1E9PXX9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc28a1E9PXX9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc28a1E9PXX9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.85■□□□□ 0.93
Slc28a1E9PXX9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.85■□□□□ 0.93
Slc28a1E9PXX9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc28a1E9PXX9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc28a1E9PXX9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.83■□□□□ 0.93
Slc28a1E9PXX9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc28a1E9PXX9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc28a1E9PXX9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Slc28a1E9PXX9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Slc28a1E9PXX9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms