Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smim17A0A504 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Smim17A0A504 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.27■□□□□ 0.83
Smim17A0A504 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smim17A0A504 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smim17A0A504 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smim17A0A504 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
Smim17A0A504 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smim17A0A504 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.26■□□□□ 0.83
Smim17A0A504 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smim17A0A504 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Smim17A0A504 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Smim17A0A504 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smim17A0A504 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smim17A0A504 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smim17A0A504 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smim17A0A504 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smim17A0A504 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.25■□□□□ 0.83
Smim17A0A504 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smim17A0A504 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smim17A0A504 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Smim17A0A504 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Smim17A0A504 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smim17A0A504 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smim17A0A504 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smim17A0A504 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smim17A0A504 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smim17A0A504 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Smim17A0A504 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smim17A0A504 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Smim17A0A504 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Smim17A0A504 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smim17A0A504 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Smim17A0A504 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smim17A0A504 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smim17A0A504 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smim17A0A504 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Smim17A0A504 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Smim17A0A504 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smim17A0A504 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smim17A0A504 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Smim17A0A504 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.21■□□□□ 0.83
Smim17A0A504 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smim17A0A504 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smim17A0A504 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smim17A0A504 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smim17A0A504 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smim17A0A504 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smim17A0A504 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smim17A0A504 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.19■□□□□ 0.82
Smim17A0A504 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smim17A0A504 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smim17A0A504 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smim17A0A504 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smim17A0A504 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Smim17A0A504 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smim17A0A504 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Smim17A0A504 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.18■□□□□ 0.82
Smim17A0A504 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smim17A0A504 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smim17A0A504 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smim17A0A504 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smim17A0A504 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smim17A0A504 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smim17A0A504 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Smim17A0A504 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smim17A0A504 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smim17A0A504 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smim17A0A504 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smim17A0A504 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smim17A0A504 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smim17A0A504 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smim17A0A504 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smim17A0A504 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smim17A0A504 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smim17A0A504 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Smim17A0A504 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smim17A0A504 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smim17A0A504 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Smim17A0A504 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smim17A0A504 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smim17A0A504 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.13■□□□□ 0.81
Smim17A0A504 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Smim17A0A504 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smim17A0A504 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smim17A0A504 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smim17A0A504 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smim17A0A504 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smim17A0A504 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Smim17A0A504 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smim17A0A504 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Smim17A0A504 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smim17A0A504 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smim17A0A504 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smim17A0A504 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
Smim17A0A504 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smim17A0A504 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smim17A0A504 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smim17A0A504 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.09■□□□□ 0.81
Smim17A0A504 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms