Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.53■□□□□ 0.56
Lnp1A0A1B0GSK3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lnp1A0A1B0GSK3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lnp1A0A1B0GSK3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.52■□□□□ 0.56
Lnp1A0A1B0GSK3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lnp1A0A1B0GSK3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lnp1A0A1B0GSK3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Lnp1A0A1B0GSK3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.52■□□□□ 0.56
Lnp1A0A1B0GSK3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lnp1A0A1B0GSK3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lnp1A0A1B0GSK3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Lnp1A0A1B0GSK3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lnp1A0A1B0GSK3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lnp1A0A1B0GSK3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lnp1A0A1B0GSK3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lnp1A0A1B0GSK3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lnp1A0A1B0GSK3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.5■□□□□ 0.55
Lnp1A0A1B0GSK3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lnp1A0A1B0GSK3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lnp1A0A1B0GSK3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
Lnp1A0A1B0GSK3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lnp1A0A1B0GSK3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lnp1A0A1B0GSK3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lnp1A0A1B0GSK3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lnp1A0A1B0GSK3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lnp1A0A1B0GSK3 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.48■□□□□ 0.55
Lnp1A0A1B0GSK3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Lnp1A0A1B0GSK3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lnp1A0A1B0GSK3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lnp1A0A1B0GSK3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Lnp1A0A1B0GSK3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lnp1A0A1B0GSK3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lnp1A0A1B0GSK3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lnp1A0A1B0GSK3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.47■□□□□ 0.55
Lnp1A0A1B0GSK3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lnp1A0A1B0GSK3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Lnp1A0A1B0GSK3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lnp1A0A1B0GSK3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Lnp1A0A1B0GSK3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Lnp1A0A1B0GSK3 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.46■□□□□ 0.55
Lnp1A0A1B0GSK3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.46■□□□□ 0.55
Lnp1A0A1B0GSK3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lnp1A0A1B0GSK3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Lnp1A0A1B0GSK3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lnp1A0A1B0GSK3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lnp1A0A1B0GSK3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Lnp1A0A1B0GSK3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.45■□□□□ 0.54
Lnp1A0A1B0GSK3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lnp1A0A1B0GSK3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lnp1A0A1B0GSK3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.45■□□□□ 0.54
Lnp1A0A1B0GSK3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Lnp1A0A1B0GSK3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lnp1A0A1B0GSK3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lnp1A0A1B0GSK3 Scarna2-201ENSMUST00000157560 414 ntBASIC18.44■□□□□ 0.54
Lnp1A0A1B0GSK3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lnp1A0A1B0GSK3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lnp1A0A1B0GSK3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lnp1A0A1B0GSK3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lnp1A0A1B0GSK3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Lnp1A0A1B0GSK3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lnp1A0A1B0GSK3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lnp1A0A1B0GSK3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lnp1A0A1B0GSK3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lnp1A0A1B0GSK3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.41■□□□□ 0.54
Lnp1A0A1B0GSK3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Lnp1A0A1B0GSK3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Lnp1A0A1B0GSK3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lnp1A0A1B0GSK3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Lnp1A0A1B0GSK3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.4■□□□□ 0.54
Lnp1A0A1B0GSK3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lnp1A0A1B0GSK3 Gm16437-201ENSMUST00000025669 507 ntBASIC18.4■□□□□ 0.54
Lnp1A0A1B0GSK3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lnp1A0A1B0GSK3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.4■□□□□ 0.54
Lnp1A0A1B0GSK3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lnp1A0A1B0GSK3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lnp1A0A1B0GSK3 Gm9806-201ENSMUST00000051080 552 ntBASIC18.39■□□□□ 0.53
Lnp1A0A1B0GSK3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lnp1A0A1B0GSK3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lnp1A0A1B0GSK3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lnp1A0A1B0GSK3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lnp1A0A1B0GSK3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lnp1A0A1B0GSK3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Lnp1A0A1B0GSK3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.37■□□□□ 0.53
Lnp1A0A1B0GSK3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lnp1A0A1B0GSK3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Lnp1A0A1B0GSK3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lnp1A0A1B0GSK3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lnp1A0A1B0GSK3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lnp1A0A1B0GSK3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lnp1A0A1B0GSK3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lnp1A0A1B0GSK3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lnp1A0A1B0GSK3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Lnp1A0A1B0GSK3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Lnp1A0A1B0GSK3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lnp1A0A1B0GSK3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lnp1A0A1B0GSK3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lnp1A0A1B0GSK3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lnp1A0A1B0GSK3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Lnp1A0A1B0GSK3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lnp1A0A1B0GSK3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms