Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ccdc194A0A140LIT1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ccdc194A0A140LIT1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ccdc194A0A140LIT1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.08■■□□□ 1.13
Ccdc194A0A140LIT1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.08■■□□□ 1.13
Ccdc194A0A140LIT1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
Ccdc194A0A140LIT1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ccdc194A0A140LIT1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ccdc194A0A140LIT1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ccdc194A0A140LIT1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ccdc194A0A140LIT1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ccdc194A0A140LIT1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
Ccdc194A0A140LIT1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ccdc194A0A140LIT1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ccdc194A0A140LIT1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ccdc194A0A140LIT1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ccdc194A0A140LIT1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ccdc194A0A140LIT1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Ccdc194A0A140LIT1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ccdc194A0A140LIT1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ccdc194A0A140LIT1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Ccdc194A0A140LIT1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ccdc194A0A140LIT1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ccdc194A0A140LIT1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Ccdc194A0A140LIT1 Mir3960-201ENSMUST00000198213 73 ntBASIC22.03■■□□□ 1.12
Ccdc194A0A140LIT1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ccdc194A0A140LIT1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ccdc194A0A140LIT1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.03■■□□□ 1.12
Ccdc194A0A140LIT1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Ccdc194A0A140LIT1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ccdc194A0A140LIT1 Gm11599-201ENSMUST00000118720 878 ntBASIC22.02■■□□□ 1.12
Ccdc194A0A140LIT1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
Ccdc194A0A140LIT1 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.02■■□□□ 1.12
Ccdc194A0A140LIT1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ccdc194A0A140LIT1 Gm9812-201ENSMUST00000061934 968 ntBASIC22.02■■□□□ 1.12
Ccdc194A0A140LIT1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ccdc194A0A140LIT1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
Ccdc194A0A140LIT1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Ccdc194A0A140LIT1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC22.01■■□□□ 1.11
Ccdc194A0A140LIT1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Ccdc194A0A140LIT1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Ccdc194A0A140LIT1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ccdc194A0A140LIT1 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.01■■□□□ 1.11
Ccdc194A0A140LIT1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ccdc194A0A140LIT1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.01■■□□□ 1.11
Ccdc194A0A140LIT1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ccdc194A0A140LIT1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ccdc194A0A140LIT1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Ccdc194A0A140LIT1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ccdc194A0A140LIT1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC22■■□□□ 1.11
Ccdc194A0A140LIT1 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ccdc194A0A140LIT1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Ccdc194A0A140LIT1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.99■■□□□ 1.11
Ccdc194A0A140LIT1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ccdc194A0A140LIT1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Ccdc194A0A140LIT1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Ccdc194A0A140LIT1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Ccdc194A0A140LIT1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ccdc194A0A140LIT1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ccdc194A0A140LIT1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Ccdc194A0A140LIT1 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.98■■□□□ 1.11
Ccdc194A0A140LIT1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc194A0A140LIT1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc194A0A140LIT1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc194A0A140LIT1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc194A0A140LIT1 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc194A0A140LIT1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc194A0A140LIT1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.97■■□□□ 1.11
Ccdc194A0A140LIT1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.97■■□□□ 1.11
Ccdc194A0A140LIT1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc194A0A140LIT1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc194A0A140LIT1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.96■■□□□ 1.11
Ccdc194A0A140LIT1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc194A0A140LIT1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc194A0A140LIT1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc194A0A140LIT1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Ccdc194A0A140LIT1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc194A0A140LIT1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.95■■□□□ 1.1
Ccdc194A0A140LIT1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc194A0A140LIT1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc194A0A140LIT1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Ccdc194A0A140LIT1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc194A0A140LIT1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Ccdc194A0A140LIT1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.94■■□□□ 1.1
Ccdc194A0A140LIT1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ccdc194A0A140LIT1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ccdc194A0A140LIT1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.94■■□□□ 1.1
Ccdc194A0A140LIT1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc194A0A140LIT1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc194A0A140LIT1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc194A0A140LIT1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc194A0A140LIT1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc194A0A140LIT1 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Ccdc194A0A140LIT1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.91■■□□□ 1.1
Ccdc194A0A140LIT1 Gm45364-201ENSMUST00000210883 159 ntBASIC21.91■■□□□ 1.1
Ccdc194A0A140LIT1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc194A0A140LIT1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Ccdc194A0A140LIT1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc194A0A140LIT1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ccdc194A0A140LIT1 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.9■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms