Protein–RNA interactions for Protein: A0A0G2JF94

Trav14-1, T cell receptor alpha variable 14-1 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14-1A0A0G2JF94 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav14-1A0A0G2JF94 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav14-1A0A0G2JF94 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav14-1A0A0G2JF94 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav14-1A0A0G2JF94 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav14-1A0A0G2JF94 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav14-1A0A0G2JF94 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav14-1A0A0G2JF94 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav14-1A0A0G2JF94 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav14-1A0A0G2JF94 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav14-1A0A0G2JF94 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav14-1A0A0G2JF94 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav14-1A0A0G2JF94 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav14-1A0A0G2JF94 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav14-1A0A0G2JF94 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav14-1A0A0G2JF94 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav14-1A0A0G2JF94 Gm8503-201ENSMUST00000118131 455 ntBASIC14.64□□□□□ -0.07
Trav14-1A0A0G2JF94 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav14-1A0A0G2JF94 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC14.64□□□□□ -0.07
Trav14-1A0A0G2JF94 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC14.64□□□□□ -0.07
Trav14-1A0A0G2JF94 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC14.64□□□□□ -0.07
Trav14-1A0A0G2JF94 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav14-1A0A0G2JF94 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav14-1A0A0G2JF94 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav14-1A0A0G2JF94 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav14-1A0A0G2JF94 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav14-1A0A0G2JF94 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Trav14-1A0A0G2JF94 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav14-1A0A0G2JF94 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav14-1A0A0G2JF94 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav14-1A0A0G2JF94 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav14-1A0A0G2JF94 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav14-1A0A0G2JF94 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC14.62□□□□□ -0.07
Trav14-1A0A0G2JF94 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC14.62□□□□□ -0.07
Trav14-1A0A0G2JF94 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav14-1A0A0G2JF94 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav14-1A0A0G2JF94 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav14-1A0A0G2JF94 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav14-1A0A0G2JF94 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav14-1A0A0G2JF94 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav14-1A0A0G2JF94 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav14-1A0A0G2JF94 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav14-1A0A0G2JF94 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav14-1A0A0G2JF94 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
Trav14-1A0A0G2JF94 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav14-1A0A0G2JF94 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav14-1A0A0G2JF94 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav14-1A0A0G2JF94 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trav14-1A0A0G2JF94 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav14-1A0A0G2JF94 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav14-1A0A0G2JF94 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
Trav14-1A0A0G2JF94 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav14-1A0A0G2JF94 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav14-1A0A0G2JF94 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav14-1A0A0G2JF94 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav14-1A0A0G2JF94 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav14-1A0A0G2JF94 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC14.59□□□□□ -0.07
Trav14-1A0A0G2JF94 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav14-1A0A0G2JF94 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav14-1A0A0G2JF94 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav14-1A0A0G2JF94 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav14-1A0A0G2JF94 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav14-1A0A0G2JF94 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav14-1A0A0G2JF94 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav14-1A0A0G2JF94 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav14-1A0A0G2JF94 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav14-1A0A0G2JF94 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav14-1A0A0G2JF94 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav14-1A0A0G2JF94 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14-1A0A0G2JF94 Gm4799-201ENSMUST00000095396 657 ntBASIC14.57□□□□□ -0.08
Trav14-1A0A0G2JF94 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14-1A0A0G2JF94 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14-1A0A0G2JF94 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav14-1A0A0G2JF94 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14-1A0A0G2JF94 Gm13889-201ENSMUST00000099689 1386 ntBASIC14.57□□□□□ -0.08
Trav14-1A0A0G2JF94 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav14-1A0A0G2JF94 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14-1A0A0G2JF94 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav14-1A0A0G2JF94 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav14-1A0A0G2JF94 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14-1A0A0G2JF94 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14-1A0A0G2JF94 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav14-1A0A0G2JF94 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav14-1A0A0G2JF94 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav14-1A0A0G2JF94 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav14-1A0A0G2JF94 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav14-1A0A0G2JF94 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav14-1A0A0G2JF94 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav14-1A0A0G2JF94 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav14-1A0A0G2JF94 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav14-1A0A0G2JF94 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav14-1A0A0G2JF94 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC14.55□□□□□ -0.08
Trav14-1A0A0G2JF94 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav14-1A0A0G2JF94 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav14-1A0A0G2JF94 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav14-1A0A0G2JF94 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav14-1A0A0G2JF94 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav14-1A0A0G2JF94 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav14-1A0A0G2JF94 H3f3aos-201ENSMUST00000097448 2905 ntBASIC14.54□□□□□ -0.08
Trav14-1A0A0G2JF94 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms