Protein–RNA interactions for Protein: A0A0G2JEW2

Tcrg-V3, T cell receptor gamma, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V3A0A0G2JEW2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Tcrg-V3A0A0G2JEW2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Tcrg-V3A0A0G2JEW2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tcrg-V3A0A0G2JEW2 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.69■■□□□ 1.06
Tcrg-V3A0A0G2JEW2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tcrg-V3A0A0G2JEW2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Tcrg-V3A0A0G2JEW2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tcrg-V3A0A0G2JEW2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.68■■□□□ 1.06
Tcrg-V3A0A0G2JEW2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tcrg-V3A0A0G2JEW2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tcrg-V3A0A0G2JEW2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tcrg-V3A0A0G2JEW2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tcrg-V3A0A0G2JEW2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.67■■□□□ 1.06
Tcrg-V3A0A0G2JEW2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.67■■□□□ 1.06
Tcrg-V3A0A0G2JEW2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tcrg-V3A0A0G2JEW2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tcrg-V3A0A0G2JEW2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tcrg-V3A0A0G2JEW2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tcrg-V3A0A0G2JEW2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tcrg-V3A0A0G2JEW2 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.66■■□□□ 1.06
Tcrg-V3A0A0G2JEW2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Tcrg-V3A0A0G2JEW2 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.66■■□□□ 1.06
Tcrg-V3A0A0G2JEW2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Tcrg-V3A0A0G2JEW2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tcrg-V3A0A0G2JEW2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.64■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.6■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.58■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tcrg-V3A0A0G2JEW2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.58■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.57■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.57■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.55■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.52■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Tcrg-V3A0A0G2JEW2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.51■■□□□ 1.03
Tcrg-V3A0A0G2JEW2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tcrg-V3A0A0G2JEW2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tcrg-V3A0A0G2JEW2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Tcrg-V3A0A0G2JEW2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Tcrg-V3A0A0G2JEW2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Tcrg-V3A0A0G2JEW2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Tcrg-V3A0A0G2JEW2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
Tcrg-V3A0A0G2JEW2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tcrg-V3A0A0G2JEW2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms