Protein–RNA interactions for Protein: A0A0B4J1I1

Igkv16-104, Immunoglobulin kappa variable 16-104 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv16-104A0A0B4J1I1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Igkv16-104A0A0B4J1I1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Igkv16-104A0A0B4J1I1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Igkv16-104A0A0B4J1I1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Igkv16-104A0A0B4J1I1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Igkv16-104A0A0B4J1I1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Igkv16-104A0A0B4J1I1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Igkv16-104A0A0B4J1I1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Igkv16-104A0A0B4J1I1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Igkv16-104A0A0B4J1I1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Igkv16-104A0A0B4J1I1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Igkv16-104A0A0B4J1I1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.07■■□□□ 1.28
Igkv16-104A0A0B4J1I1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Igkv16-104A0A0B4J1I1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Igkv16-104A0A0B4J1I1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Igkv16-104A0A0B4J1I1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Igkv16-104A0A0B4J1I1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Igkv16-104A0A0B4J1I1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.05■■□□□ 1.28
Igkv16-104A0A0B4J1I1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Igkv16-104A0A0B4J1I1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Igkv16-104A0A0B4J1I1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Igkv16-104A0A0B4J1I1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Igkv16-104A0A0B4J1I1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.04■■□□□ 1.28
Igkv16-104A0A0B4J1I1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Igkv16-104A0A0B4J1I1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Igkv16-104A0A0B4J1I1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC23.04■■□□□ 1.28
Igkv16-104A0A0B4J1I1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Igkv16-104A0A0B4J1I1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Igkv16-104A0A0B4J1I1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Igkv16-104A0A0B4J1I1 Gm15039-201ENSMUST00000118914 875 ntBASIC23.03■■□□□ 1.28
Igkv16-104A0A0B4J1I1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC23.03■■□□□ 1.28
Igkv16-104A0A0B4J1I1 Gm45102-201ENSMUST00000207427 857 ntBASIC23.03■■□□□ 1.28
Igkv16-104A0A0B4J1I1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.03■■□□□ 1.28
Igkv16-104A0A0B4J1I1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.02■■□□□ 1.28
Igkv16-104A0A0B4J1I1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Igkv16-104A0A0B4J1I1 Gm42501-201ENSMUST00000200220 1026 ntBASIC23.02■■□□□ 1.28
Igkv16-104A0A0B4J1I1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Igkv16-104A0A0B4J1I1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.01■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.01■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Igkv16-104A0A0B4J1I1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC23.01■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Igkv16-104A0A0B4J1I1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC23■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC23■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.98■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.98■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Gm18755-201ENSMUST00000218030 1099 ntBASIC22.98■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Gm14117-201ENSMUST00000122417 843 ntBASIC22.97■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Igkv16-104A0A0B4J1I1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Igkv16-104A0A0B4J1I1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Igkv16-104A0A0B4J1I1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Igkv16-104A0A0B4J1I1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Igkv16-104A0A0B4J1I1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Igkv16-104A0A0B4J1I1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Igkv16-104A0A0B4J1I1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22.94■■□□□ 1.26
Igkv16-104A0A0B4J1I1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Igkv16-104A0A0B4J1I1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Igkv16-104A0A0B4J1I1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC22.93■■□□□ 1.26
Igkv16-104A0A0B4J1I1 Gm9959-201ENSMUST00000068277 390 ntBASIC22.93■■□□□ 1.26
Igkv16-104A0A0B4J1I1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Igkv16-104A0A0B4J1I1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Igkv16-104A0A0B4J1I1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Igkv16-104A0A0B4J1I1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Igkv16-104A0A0B4J1I1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Igkv16-104A0A0B4J1I1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Igkv16-104A0A0B4J1I1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
Igkv16-104A0A0B4J1I1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Igkv16-104A0A0B4J1I1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Igkv16-104A0A0B4J1I1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Igkv16-104A0A0B4J1I1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.9■■□□□ 1.26
Igkv16-104A0A0B4J1I1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.9■■□□□ 1.26
Igkv16-104A0A0B4J1I1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Igkv16-104A0A0B4J1I1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Igkv16-104A0A0B4J1I1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Igkv16-104A0A0B4J1I1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.89■■□□□ 1.25
Igkv16-104A0A0B4J1I1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Igkv16-104A0A0B4J1I1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC22.88■■□□□ 1.25
Igkv16-104A0A0B4J1I1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms