Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ighv1-47A0A0A6YY41 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-47A0A0A6YY41 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.4■□□□□ 0.54
Ighv1-47A0A0A6YY41 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ighv1-47A0A0A6YY41 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-47A0A0A6YY41 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-47A0A0A6YY41 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-47A0A0A6YY41 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-47A0A0A6YY41 Gm4799-201ENSMUST00000095396 657 ntBASIC18.39■□□□□ 0.53
Ighv1-47A0A0A6YY41 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-47A0A0A6YY41 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-47A0A0A6YY41 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-47A0A0A6YY41 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Ighv1-47A0A0A6YY41 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-47A0A0A6YY41 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-47A0A0A6YY41 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-47A0A0A6YY41 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-47A0A0A6YY41 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.38■□□□□ 0.53
Ighv1-47A0A0A6YY41 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.38■□□□□ 0.53
Ighv1-47A0A0A6YY41 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-47A0A0A6YY41 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-47A0A0A6YY41 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-47A0A0A6YY41 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-47A0A0A6YY41 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.37■□□□□ 0.53
Ighv1-47A0A0A6YY41 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-47A0A0A6YY41 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
Ighv1-47A0A0A6YY41 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv1-47A0A0A6YY41 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.36■□□□□ 0.53
Ighv1-47A0A0A6YY41 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv1-47A0A0A6YY41 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-47A0A0A6YY41 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-47A0A0A6YY41 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.35■□□□□ 0.53
Ighv1-47A0A0A6YY41 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-47A0A0A6YY41 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-47A0A0A6YY41 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-47A0A0A6YY41 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.35■□□□□ 0.53
Ighv1-47A0A0A6YY41 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-47A0A0A6YY41 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.35■□□□□ 0.53
Ighv1-47A0A0A6YY41 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ighv1-47A0A0A6YY41 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-47A0A0A6YY41 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ighv1-47A0A0A6YY41 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-47A0A0A6YY41 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-47A0A0A6YY41 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-47A0A0A6YY41 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-47A0A0A6YY41 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Ighv1-47A0A0A6YY41 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Ighv1-47A0A0A6YY41 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ighv1-47A0A0A6YY41 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Ighv1-47A0A0A6YY41 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ighv1-47A0A0A6YY41 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-47A0A0A6YY41 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-47A0A0A6YY41 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-47A0A0A6YY41 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.33■□□□□ 0.52
Ighv1-47A0A0A6YY41 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-47A0A0A6YY41 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-47A0A0A6YY41 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-47A0A0A6YY41 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-47A0A0A6YY41 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ighv1-47A0A0A6YY41 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-47A0A0A6YY41 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-47A0A0A6YY41 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Ighv1-47A0A0A6YY41 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ighv1-47A0A0A6YY41 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-47A0A0A6YY41 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Ighv1-47A0A0A6YY41 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Ighv1-47A0A0A6YY41 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-47A0A0A6YY41 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-47A0A0A6YY41 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-47A0A0A6YY41 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-47A0A0A6YY41 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ighv1-47A0A0A6YY41 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-47A0A0A6YY41 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-47A0A0A6YY41 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-47A0A0A6YY41 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-47A0A0A6YY41 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-47A0A0A6YY41 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-47A0A0A6YY41 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ighv1-47A0A0A6YY41 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ighv1-47A0A0A6YY41 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-47A0A0A6YY41 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-47A0A0A6YY41 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ighv1-47A0A0A6YY41 Mir3960-201ENSMUST00000198213 73 ntBASIC18.28■□□□□ 0.52
Ighv1-47A0A0A6YY41 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.28■□□□□ 0.52
Ighv1-47A0A0A6YY41 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-47A0A0A6YY41 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-47A0A0A6YY41 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-47A0A0A6YY41 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.27■□□□□ 0.52
Ighv1-47A0A0A6YY41 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.27■□□□□ 0.52
Ighv1-47A0A0A6YY41 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-47A0A0A6YY41 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ighv1-47A0A0A6YY41 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-47A0A0A6YY41 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-47A0A0A6YY41 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-47A0A0A6YY41 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-47A0A0A6YY41 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-47A0A0A6YY41 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-47A0A0A6YY41 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-47A0A0A6YY41 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Ighv1-47A0A0A6YY41 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms