Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trav10A0A075B642 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav10A0A075B642 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav10A0A075B642 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Trav10A0A075B642 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav10A0A075B642 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav10A0A075B642 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav10A0A075B642 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav10A0A075B642 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav10A0A075B642 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav10A0A075B642 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Trav10A0A075B642 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav10A0A075B642 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav10A0A075B642 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trav10A0A075B642 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav10A0A075B642 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.72■□□□□ 0.75
Trav10A0A075B642 Scarna2-201ENSMUST00000157560 414 ntBASIC19.72■□□□□ 0.75
Trav10A0A075B642 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav10A0A075B642 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav10A0A075B642 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trav10A0A075B642 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav10A0A075B642 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trav10A0A075B642 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav10A0A075B642 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.71■□□□□ 0.75
Trav10A0A075B642 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.71■□□□□ 0.75
Trav10A0A075B642 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trav10A0A075B642 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.71■□□□□ 0.75
Trav10A0A075B642 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trav10A0A075B642 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav10A0A075B642 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.7■□□□□ 0.74
Trav10A0A075B642 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trav10A0A075B642 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Trav10A0A075B642 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav10A0A075B642 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Trav10A0A075B642 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
Trav10A0A075B642 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav10A0A075B642 Gm16437-201ENSMUST00000025669 507 ntBASIC19.69■□□□□ 0.74
Trav10A0A075B642 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav10A0A075B642 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav10A0A075B642 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Trav10A0A075B642 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav10A0A075B642 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav10A0A075B642 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.68■□□□□ 0.74
Trav10A0A075B642 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trav10A0A075B642 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav10A0A075B642 Gm9806-201ENSMUST00000051080 552 ntBASIC19.67■□□□□ 0.74
Trav10A0A075B642 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trav10A0A075B642 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav10A0A075B642 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav10A0A075B642 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.66■□□□□ 0.74
Trav10A0A075B642 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Trav10A0A075B642 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav10A0A075B642 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trav10A0A075B642 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav10A0A075B642 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav10A0A075B642 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav10A0A075B642 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trav10A0A075B642 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Trav10A0A075B642 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav10A0A075B642 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Trav10A0A075B642 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trav10A0A075B642 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trav10A0A075B642 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.64■□□□□ 0.73
Trav10A0A075B642 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav10A0A075B642 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav10A0A075B642 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav10A0A075B642 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav10A0A075B642 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.63■□□□□ 0.73
Trav10A0A075B642 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav10A0A075B642 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav10A0A075B642 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.62■□□□□ 0.73
Trav10A0A075B642 Gm11687-201ENSMUST00000118911 886 ntBASIC19.62■□□□□ 0.73
Trav10A0A075B642 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Trav10A0A075B642 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trav10A0A075B642 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav10A0A075B642 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav10A0A075B642 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trav10A0A075B642 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trav10A0A075B642 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav10A0A075B642 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav10A0A075B642 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav10A0A075B642 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trav10A0A075B642 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trav10A0A075B642 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav10A0A075B642 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav10A0A075B642 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav10A0A075B642 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav10A0A075B642 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav10A0A075B642 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav10A0A075B642 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trav10A0A075B642 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.59■□□□□ 0.73
Trav10A0A075B642 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav10A0A075B642 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav10A0A075B642 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav10A0A075B642 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Trav10A0A075B642 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trav10A0A075B642 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.58■□□□□ 0.73
Trav10A0A075B642 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Trav10A0A075B642 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Trav10A0A075B642 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms