Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Gm18057-201ENSMUST00000208220 503 ntBASIC14.81□□□□□ -0.04
Hoxb3P09026 Gm6888-201ENSMUST00000221983 706 ntBASIC14.81□□□□□ -0.04
Hoxb3P09026 AC154634.3-201ENSMUST00000224589 736 ntBASIC14.81□□□□□ -0.04
Hoxb3P09026 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.81□□□□□ -0.04
Hoxb3P09026 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxb3P09026 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxb3P09026 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.81□□□□□ -0.04
Hoxb3P09026 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxb3P09026 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxb3P09026 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxb3P09026 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxb3P09026 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxb3P09026 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Hoxb3P09026 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxb3P09026 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxb3P09026 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Hoxb3P09026 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxb3P09026 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Hoxb3P09026 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxb3P09026 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxb3P09026 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.8□□□□□ -0.04
Hoxb3P09026 Gm14716-201ENSMUST00000120138 718 ntBASIC14.8□□□□□ -0.04
Hoxb3P09026 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Hoxb3P09026 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxb3P09026 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.8□□□□□ -0.04
Hoxb3P09026 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.8□□□□□ -0.04
Hoxb3P09026 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.8□□□□□ -0.04
Hoxb3P09026 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.8□□□□□ -0.04
Hoxb3P09026 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxb3P09026 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxb3P09026 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxb3P09026 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxb3P09026 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxb3P09026 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxb3P09026 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxb3P09026 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxb3P09026 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Hoxb3P09026 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxb3P09026 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Hoxb3P09026 Prob1-201ENSMUST00000097619 3021 ntBASIC14.79□□□□□ -0.04
Hoxb3P09026 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxb3P09026 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxb3P09026 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxb3P09026 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxb3P09026 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.79□□□□□ -0.04
Hoxb3P09026 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Hoxb3P09026 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxb3P09026 Gm38241-201ENSMUST00000192641 898 ntBASIC14.79□□□□□ -0.04
Hoxb3P09026 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Hoxb3P09026 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.79□□□□□ -0.04
Hoxb3P09026 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxb3P09026 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC14.79□□□□□ -0.04
Hoxb3P09026 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxb3P09026 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.79□□□□□ -0.04
Hoxb3P09026 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.79□□□□□ -0.04
Hoxb3P09026 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxb3P09026 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxb3P09026 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxb3P09026 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Hoxb3P09026 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxb3P09026 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxb3P09026 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxb3P09026 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxb3P09026 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxb3P09026 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxb3P09026 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxb3P09026 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxb3P09026 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxb3P09026 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Hoxb3P09026 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxb3P09026 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxb3P09026 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Hoxb3P09026 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxb3P09026 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxb3P09026 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxb3P09026 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxb3P09026 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Hoxb3P09026 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxb3P09026 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxb3P09026 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxb3P09026 Gm15236-201ENSMUST00000117309 379 ntBASIC14.78□□□□□ -0.04
Hoxb3P09026 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.78□□□□□ -0.04
Hoxb3P09026 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.78□□□□□ -0.04
Hoxb3P09026 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxb3P09026 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxb3P09026 Gm45784-201ENSMUST00000188360 142 ntBASIC14.78□□□□□ -0.04
Hoxb3P09026 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.78□□□□□ -0.04
Hoxb3P09026 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.78□□□□□ -0.04
Hoxb3P09026 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxb3P09026 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxb3P09026 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxb3P09026 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.78□□□□□ -0.04
Hoxb3P09026 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Hoxb3P09026 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxb3P09026 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.78□□□□□ -0.04
Hoxb3P09026 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxb3P09026 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxb3P09026 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxb3P09026 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Hoxb3P09026 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 118.3 ms