Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Upk1bQ9Z2C6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Upk1bQ9Z2C6 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Upk1bQ9Z2C6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Upk1bQ9Z2C6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Upk1bQ9Z2C6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Upk1bQ9Z2C6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Upk1bQ9Z2C6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Upk1bQ9Z2C6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Upk1bQ9Z2C6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.9■□□□□ 0.94
Upk1bQ9Z2C6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Upk1bQ9Z2C6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Upk1bQ9Z2C6 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Upk1bQ9Z2C6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Upk1bQ9Z2C6 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Upk1bQ9Z2C6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Upk1bQ9Z2C6 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Upk1bQ9Z2C6 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Upk1bQ9Z2C6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Upk1bQ9Z2C6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.86■□□□□ 0.93
Upk1bQ9Z2C6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Upk1bQ9Z2C6 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.86■□□□□ 0.93
Upk1bQ9Z2C6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Upk1bQ9Z2C6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Upk1bQ9Z2C6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Upk1bQ9Z2C6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Upk1bQ9Z2C6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Upk1bQ9Z2C6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Upk1bQ9Z2C6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Upk1bQ9Z2C6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Upk1bQ9Z2C6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.85■□□□□ 0.93
Upk1bQ9Z2C6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Upk1bQ9Z2C6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.84■□□□□ 0.93
Upk1bQ9Z2C6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Upk1bQ9Z2C6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Upk1bQ9Z2C6 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.83■□□□□ 0.93
Upk1bQ9Z2C6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Upk1bQ9Z2C6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
Upk1bQ9Z2C6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Upk1bQ9Z2C6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Upk1bQ9Z2C6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.82■□□□□ 0.92
Upk1bQ9Z2C6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Upk1bQ9Z2C6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Upk1bQ9Z2C6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Upk1bQ9Z2C6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Upk1bQ9Z2C6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Upk1bQ9Z2C6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Upk1bQ9Z2C6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Upk1bQ9Z2C6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.79■□□□□ 0.92
Upk1bQ9Z2C6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Upk1bQ9Z2C6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Upk1bQ9Z2C6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Upk1bQ9Z2C6 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Upk1bQ9Z2C6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Upk1bQ9Z2C6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Upk1bQ9Z2C6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Upk1bQ9Z2C6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Upk1bQ9Z2C6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Upk1bQ9Z2C6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Upk1bQ9Z2C6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Upk1bQ9Z2C6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Upk1bQ9Z2C6 Gm45855-201ENSMUST00000212546 880 ntBASIC20.77■□□□□ 0.92
Upk1bQ9Z2C6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Upk1bQ9Z2C6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Upk1bQ9Z2C6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
Upk1bQ9Z2C6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Upk1bQ9Z2C6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Upk1bQ9Z2C6 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Upk1bQ9Z2C6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.75■□□□□ 0.91
Upk1bQ9Z2C6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Upk1bQ9Z2C6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Upk1bQ9Z2C6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Upk1bQ9Z2C6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Upk1bQ9Z2C6 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.74■□□□□ 0.91
Upk1bQ9Z2C6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
Upk1bQ9Z2C6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Upk1bQ9Z2C6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Upk1bQ9Z2C6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Upk1bQ9Z2C6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Upk1bQ9Z2C6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Upk1bQ9Z2C6 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.72■□□□□ 0.91
Upk1bQ9Z2C6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Upk1bQ9Z2C6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Upk1bQ9Z2C6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Upk1bQ9Z2C6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.72■□□□□ 0.91
Upk1bQ9Z2C6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Upk1bQ9Z2C6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
Upk1bQ9Z2C6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Upk1bQ9Z2C6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Upk1bQ9Z2C6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.72■□□□□ 0.91
Upk1bQ9Z2C6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Upk1bQ9Z2C6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Upk1bQ9Z2C6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Upk1bQ9Z2C6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.71■□□□□ 0.91
Upk1bQ9Z2C6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.71■□□□□ 0.91
Upk1bQ9Z2C6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Upk1bQ9Z2C6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.7■□□□□ 0.9
Upk1bQ9Z2C6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.7■□□□□ 0.9
Upk1bQ9Z2C6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Upk1bQ9Z2C6 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms