Protein–RNA interactions for Protein: Q9Z1G3

Atp6v1c1, V-type proton ATPase subunit C 1, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1c1Q9Z1G3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Atp6v1c1Q9Z1G3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Atp6v1c1Q9Z1G3 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.97■■□□□ 1.11
Atp6v1c1Q9Z1G3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Atp6v1c1Q9Z1G3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
Atp6v1c1Q9Z1G3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
Atp6v1c1Q9Z1G3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Atp6v1c1Q9Z1G3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Atp6v1c1Q9Z1G3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Atp6v1c1Q9Z1G3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.96■■□□□ 1.11
Atp6v1c1Q9Z1G3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Atp6v1c1Q9Z1G3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Atp6v1c1Q9Z1G3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Atp6v1c1Q9Z1G3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Atp6v1c1Q9Z1G3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Atp6v1c1Q9Z1G3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Atp6v1c1Q9Z1G3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Atp6v1c1Q9Z1G3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Atp6v1c1Q9Z1G3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Atp6v1c1Q9Z1G3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Atp6v1c1Q9Z1G3 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.94■■□□□ 1.1
Atp6v1c1Q9Z1G3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Atp6v1c1Q9Z1G3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.94■■□□□ 1.1
Atp6v1c1Q9Z1G3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
Atp6v1c1Q9Z1G3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Atp6v1c1Q9Z1G3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Atp6v1c1Q9Z1G3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Atp6v1c1Q9Z1G3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Atp6v1c1Q9Z1G3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Atp6v1c1Q9Z1G3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Atp6v1c1Q9Z1G3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Atp6v1c1Q9Z1G3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.91■■□□□ 1.1
Atp6v1c1Q9Z1G3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Atp6v1c1Q9Z1G3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Atp6v1c1Q9Z1G3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Atp6v1c1Q9Z1G3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Atp6v1c1Q9Z1G3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Atp6v1c1Q9Z1G3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Atp6v1c1Q9Z1G3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
Atp6v1c1Q9Z1G3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Atp6v1c1Q9Z1G3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Atp6v1c1Q9Z1G3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Atp6v1c1Q9Z1G3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.88■■□□□ 1.09
Atp6v1c1Q9Z1G3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Atp6v1c1Q9Z1G3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Atp6v1c1Q9Z1G3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Atp6v1c1Q9Z1G3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.87■■□□□ 1.09
Atp6v1c1Q9Z1G3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Atp6v1c1Q9Z1G3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Atp6v1c1Q9Z1G3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Atp6v1c1Q9Z1G3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Atp6v1c1Q9Z1G3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Atp6v1c1Q9Z1G3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Atp6v1c1Q9Z1G3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.85■■□□□ 1.09
Atp6v1c1Q9Z1G3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Atp6v1c1Q9Z1G3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
Atp6v1c1Q9Z1G3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Atp6v1c1Q9Z1G3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Atp6v1c1Q9Z1G3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.84■■□□□ 1.09
Atp6v1c1Q9Z1G3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Atp6v1c1Q9Z1G3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Atp6v1c1Q9Z1G3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Atp6v1c1Q9Z1G3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Atp6v1c1Q9Z1G3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Atp6v1c1Q9Z1G3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Atp6v1c1Q9Z1G3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.83■■□□□ 1.09
Atp6v1c1Q9Z1G3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.83■■□□□ 1.08
Atp6v1c1Q9Z1G3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Atp6v1c1Q9Z1G3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Atp6v1c1Q9Z1G3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Atp6v1c1Q9Z1G3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Atp6v1c1Q9Z1G3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Atp6v1c1Q9Z1G3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Atp6v1c1Q9Z1G3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Atp6v1c1Q9Z1G3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Atp6v1c1Q9Z1G3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atp6v1c1Q9Z1G3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Atp6v1c1Q9Z1G3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atp6v1c1Q9Z1G3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Atp6v1c1Q9Z1G3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atp6v1c1Q9Z1G3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Atp6v1c1Q9Z1G3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Atp6v1c1Q9Z1G3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Atp6v1c1Q9Z1G3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Atp6v1c1Q9Z1G3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atp6v1c1Q9Z1G3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atp6v1c1Q9Z1G3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atp6v1c1Q9Z1G3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atp6v1c1Q9Z1G3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Atp6v1c1Q9Z1G3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atp6v1c1Q9Z1G3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Atp6v1c1Q9Z1G3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Atp6v1c1Q9Z1G3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atp6v1c1Q9Z1G3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Atp6v1c1Q9Z1G3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atp6v1c1Q9Z1G3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
Atp6v1c1Q9Z1G3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Atp6v1c1Q9Z1G3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atp6v1c1Q9Z1G3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atp6v1c1Q9Z1G3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms