Protein–RNA interactions for Protein: Q9DA19

Cir1, Corepressor interacting with RBPJ 1, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cir1Q9DA19 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cir1Q9DA19 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cir1Q9DA19 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cir1Q9DA19 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cir1Q9DA19 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cir1Q9DA19 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cir1Q9DA19 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cir1Q9DA19 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cir1Q9DA19 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cir1Q9DA19 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cir1Q9DA19 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.34■□□□□ 0.69
Cir1Q9DA19 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cir1Q9DA19 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cir1Q9DA19 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cir1Q9DA19 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cir1Q9DA19 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cir1Q9DA19 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cir1Q9DA19 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cir1Q9DA19 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Cir1Q9DA19 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cir1Q9DA19 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cir1Q9DA19 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cir1Q9DA19 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
Cir1Q9DA19 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.32■□□□□ 0.68
Cir1Q9DA19 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cir1Q9DA19 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cir1Q9DA19 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cir1Q9DA19 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cir1Q9DA19 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Cir1Q9DA19 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cir1Q9DA19 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.32■□□□□ 0.68
Cir1Q9DA19 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cir1Q9DA19 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cir1Q9DA19 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cir1Q9DA19 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Cir1Q9DA19 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cir1Q9DA19 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cir1Q9DA19 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cir1Q9DA19 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cir1Q9DA19 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cir1Q9DA19 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cir1Q9DA19 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cir1Q9DA19 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cir1Q9DA19 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cir1Q9DA19 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cir1Q9DA19 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cir1Q9DA19 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cir1Q9DA19 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Cir1Q9DA19 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cir1Q9DA19 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
Cir1Q9DA19 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cir1Q9DA19 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cir1Q9DA19 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cir1Q9DA19 Gm11599-201ENSMUST00000118720 878 ntBASIC19.26■□□□□ 0.67
Cir1Q9DA19 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cir1Q9DA19 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cir1Q9DA19 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cir1Q9DA19 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Cir1Q9DA19 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cir1Q9DA19 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cir1Q9DA19 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cir1Q9DA19 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cir1Q9DA19 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.24■□□□□ 0.67
Cir1Q9DA19 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cir1Q9DA19 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cir1Q9DA19 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cir1Q9DA19 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cir1Q9DA19 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cir1Q9DA19 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cir1Q9DA19 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cir1Q9DA19 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cir1Q9DA19 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cir1Q9DA19 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cir1Q9DA19 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cir1Q9DA19 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cir1Q9DA19 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cir1Q9DA19 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cir1Q9DA19 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cir1Q9DA19 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cir1Q9DA19 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Cir1Q9DA19 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cir1Q9DA19 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cir1Q9DA19 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Cir1Q9DA19 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.2■□□□□ 0.66
Cir1Q9DA19 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.2■□□□□ 0.66
Cir1Q9DA19 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cir1Q9DA19 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cir1Q9DA19 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Cir1Q9DA19 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cir1Q9DA19 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cir1Q9DA19 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cir1Q9DA19 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cir1Q9DA19 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cir1Q9DA19 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.19■□□□□ 0.66
Cir1Q9DA19 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Cir1Q9DA19 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cir1Q9DA19 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cir1Q9DA19 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.18■□□□□ 0.66
Cir1Q9DA19 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cir1Q9DA19 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms