Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Trim11Q99PQ2 Mir3960-201ENSMUST00000198213 73 ntBASIC25.58■■□□□ 1.69
Trim11Q99PQ2 Gm9812-201ENSMUST00000061934 968 ntBASIC25.58■■□□□ 1.69
Trim11Q99PQ2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Trim11Q99PQ2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
Trim11Q99PQ2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC25.57■■□□□ 1.68
Trim11Q99PQ2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Trim11Q99PQ2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Trim11Q99PQ2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Trim11Q99PQ2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
Trim11Q99PQ2 AC154454.1-201ENSMUST00000225253 216 ntBASIC25.57■■□□□ 1.68
Trim11Q99PQ2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Trim11Q99PQ2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC25.56■■□□□ 1.68
Trim11Q99PQ2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Trim11Q99PQ2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
Trim11Q99PQ2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Trim11Q99PQ2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Trim11Q99PQ2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Trim11Q99PQ2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Trim11Q99PQ2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Trim11Q99PQ2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC25.54■■□□□ 1.68
Trim11Q99PQ2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Trim11Q99PQ2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Trim11Q99PQ2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Trim11Q99PQ2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC25.53■■□□□ 1.68
Trim11Q99PQ2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC25.53■■□□□ 1.68
Trim11Q99PQ2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Trim11Q99PQ2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Trim11Q99PQ2 Gm12818-201ENSMUST00000117562 1349 ntBASIC25.53■■□□□ 1.68
Trim11Q99PQ2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Trim11Q99PQ2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Trim11Q99PQ2 AC153911.1-201ENSMUST00000220378 758 ntBASIC25.52■■□□□ 1.68
Trim11Q99PQ2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Trim11Q99PQ2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Trim11Q99PQ2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC25.51■■□□□ 1.67
Trim11Q99PQ2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC25.5■■□□□ 1.67
Trim11Q99PQ2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Trim11Q99PQ2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Trim11Q99PQ2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Trim11Q99PQ2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Trim11Q99PQ2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Trim11Q99PQ2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Trim11Q99PQ2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC25.49■■□□□ 1.67
Trim11Q99PQ2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Trim11Q99PQ2 Gm45364-201ENSMUST00000210883 159 ntBASIC25.49■■□□□ 1.67
Trim11Q99PQ2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Trim11Q99PQ2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Trim11Q99PQ2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC25.49■■□□□ 1.67
Trim11Q99PQ2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Trim11Q99PQ2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Trim11Q99PQ2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Trim11Q99PQ2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC25.47■■□□□ 1.67
Trim11Q99PQ2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC25.47■■□□□ 1.67
Trim11Q99PQ2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Trim11Q99PQ2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Trim11Q99PQ2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.67
Trim11Q99PQ2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Trim11Q99PQ2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Trim11Q99PQ2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Trim11Q99PQ2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC25.44■■□□□ 1.66
Trim11Q99PQ2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Trim11Q99PQ2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC25.44■■□□□ 1.66
Trim11Q99PQ2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Trim11Q99PQ2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.43■■□□□ 1.66
Trim11Q99PQ2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Trim11Q99PQ2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Trim11Q99PQ2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Trim11Q99PQ2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Trim11Q99PQ2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC25.42■■□□□ 1.66
Trim11Q99PQ2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.42■■□□□ 1.66
Trim11Q99PQ2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.42■■□□□ 1.66
Trim11Q99PQ2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC25.42■■□□□ 1.66
Trim11Q99PQ2 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Trim11Q99PQ2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Trim11Q99PQ2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Trim11Q99PQ2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Trim11Q99PQ2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC25.41■■□□□ 1.66
Trim11Q99PQ2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
Trim11Q99PQ2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Trim11Q99PQ2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Trim11Q99PQ2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Trim11Q99PQ2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Trim11Q99PQ2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC25.4■■□□□ 1.66
Trim11Q99PQ2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Trim11Q99PQ2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Trim11Q99PQ2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Trim11Q99PQ2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Trim11Q99PQ2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Trim11Q99PQ2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
Trim11Q99PQ2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC25.38■■□□□ 1.65
Trim11Q99PQ2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Trim11Q99PQ2 Terc-201ENSMUST00000082862 423 ntBASIC25.38■■□□□ 1.65
Trim11Q99PQ2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Trim11Q99PQ2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Trim11Q99PQ2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
Trim11Q99PQ2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC25.37■■□□□ 1.65
Trim11Q99PQ2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Trim11Q99PQ2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Trim11Q99PQ2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
Trim11Q99PQ2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC25.37■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms