Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rab40cQ8VHQ4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.36■□□□□ 0.53
Rab40cQ8VHQ4 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rab40cQ8VHQ4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.36■□□□□ 0.53
Rab40cQ8VHQ4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.36■□□□□ 0.53
Rab40cQ8VHQ4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Rab40cQ8VHQ4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rab40cQ8VHQ4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rab40cQ8VHQ4 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rab40cQ8VHQ4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rab40cQ8VHQ4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab40cQ8VHQ4 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.35■□□□□ 0.53
Rab40cQ8VHQ4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab40cQ8VHQ4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab40cQ8VHQ4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rab40cQ8VHQ4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab40cQ8VHQ4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab40cQ8VHQ4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab40cQ8VHQ4 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rab40cQ8VHQ4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab40cQ8VHQ4 Gm24970-201ENSMUST00000175582 82 ntBASIC18.34■□□□□ 0.53
Rab40cQ8VHQ4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab40cQ8VHQ4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab40cQ8VHQ4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab40cQ8VHQ4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rab40cQ8VHQ4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rab40cQ8VHQ4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rab40cQ8VHQ4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rab40cQ8VHQ4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rab40cQ8VHQ4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Rab40cQ8VHQ4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rab40cQ8VHQ4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rab40cQ8VHQ4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab40cQ8VHQ4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab40cQ8VHQ4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Rab40cQ8VHQ4 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab40cQ8VHQ4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.32■□□□□ 0.52
Rab40cQ8VHQ4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab40cQ8VHQ4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Rab40cQ8VHQ4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab40cQ8VHQ4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab40cQ8VHQ4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab40cQ8VHQ4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rab40cQ8VHQ4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rab40cQ8VHQ4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab40cQ8VHQ4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab40cQ8VHQ4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab40cQ8VHQ4 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab40cQ8VHQ4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab40cQ8VHQ4 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab40cQ8VHQ4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab40cQ8VHQ4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Rab40cQ8VHQ4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab40cQ8VHQ4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rab40cQ8VHQ4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab40cQ8VHQ4 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab40cQ8VHQ4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.29■□□□□ 0.52
Rab40cQ8VHQ4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab40cQ8VHQ4 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.28■□□□□ 0.52
Rab40cQ8VHQ4 Gm9397-201ENSMUST00000200125 605 ntBASIC18.28■□□□□ 0.52
Rab40cQ8VHQ4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.28■□□□□ 0.52
Rab40cQ8VHQ4 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab40cQ8VHQ4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rab40cQ8VHQ4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Rab40cQ8VHQ4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rab40cQ8VHQ4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rab40cQ8VHQ4 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rab40cQ8VHQ4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rab40cQ8VHQ4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab40cQ8VHQ4 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Rab40cQ8VHQ4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab40cQ8VHQ4 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab40cQ8VHQ4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab40cQ8VHQ4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
Rab40cQ8VHQ4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab40cQ8VHQ4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab40cQ8VHQ4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab40cQ8VHQ4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rab40cQ8VHQ4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.25■□□□□ 0.51
Rab40cQ8VHQ4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rab40cQ8VHQ4 Gm45855-201ENSMUST00000212546 880 ntBASIC18.25■□□□□ 0.51
Rab40cQ8VHQ4 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab40cQ8VHQ4 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab40cQ8VHQ4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab40cQ8VHQ4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Rab40cQ8VHQ4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Rab40cQ8VHQ4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.24■□□□□ 0.51
Rab40cQ8VHQ4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab40cQ8VHQ4 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab40cQ8VHQ4 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab40cQ8VHQ4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Rab40cQ8VHQ4 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.23■□□□□ 0.51
Rab40cQ8VHQ4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab40cQ8VHQ4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Rab40cQ8VHQ4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab40cQ8VHQ4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab40cQ8VHQ4 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab40cQ8VHQ4 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab40cQ8VHQ4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab40cQ8VHQ4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms