Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nkd2Q8VE28 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkd2Q8VE28 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkd2Q8VE28 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Nkd2Q8VE28 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nkd2Q8VE28 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkd2Q8VE28 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.35■□□□□ 0.85
Nkd2Q8VE28 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nkd2Q8VE28 Gm45364-201ENSMUST00000210883 159 ntBASIC20.35■□□□□ 0.85
Nkd2Q8VE28 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkd2Q8VE28 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkd2Q8VE28 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nkd2Q8VE28 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Nkd2Q8VE28 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nkd2Q8VE28 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nkd2Q8VE28 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nkd2Q8VE28 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.34■□□□□ 0.85
Nkd2Q8VE28 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkd2Q8VE28 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkd2Q8VE28 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.33■□□□□ 0.85
Nkd2Q8VE28 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Nkd2Q8VE28 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Nkd2Q8VE28 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkd2Q8VE28 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkd2Q8VE28 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Nkd2Q8VE28 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nkd2Q8VE28 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkd2Q8VE28 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkd2Q8VE28 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkd2Q8VE28 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Nkd2Q8VE28 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.32■□□□□ 0.84
Nkd2Q8VE28 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.31■□□□□ 0.84
Nkd2Q8VE28 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkd2Q8VE28 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Nkd2Q8VE28 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkd2Q8VE28 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkd2Q8VE28 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nkd2Q8VE28 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.31■□□□□ 0.84
Nkd2Q8VE28 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkd2Q8VE28 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkd2Q8VE28 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Nkd2Q8VE28 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkd2Q8VE28 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkd2Q8VE28 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkd2Q8VE28 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nkd2Q8VE28 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.29■□□□□ 0.84
Nkd2Q8VE28 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.29■□□□□ 0.84
Nkd2Q8VE28 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkd2Q8VE28 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.28■□□□□ 0.84
Nkd2Q8VE28 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Nkd2Q8VE28 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkd2Q8VE28 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkd2Q8VE28 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.27■□□□□ 0.84
Nkd2Q8VE28 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Nkd2Q8VE28 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkd2Q8VE28 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Nkd2Q8VE28 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nkd2Q8VE28 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Nkd2Q8VE28 Gm7332-201ENSMUST00000118351 454 ntBASIC20.26■□□□□ 0.83
Nkd2Q8VE28 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.26■□□□□ 0.83
Nkd2Q8VE28 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkd2Q8VE28 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkd2Q8VE28 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkd2Q8VE28 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.24■□□□□ 0.83
Nkd2Q8VE28 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkd2Q8VE28 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkd2Q8VE28 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkd2Q8VE28 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nkd2Q8VE28 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkd2Q8VE28 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.23■□□□□ 0.83
Nkd2Q8VE28 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Nkd2Q8VE28 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkd2Q8VE28 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.22■□□□□ 0.83
Nkd2Q8VE28 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkd2Q8VE28 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkd2Q8VE28 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkd2Q8VE28 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkd2Q8VE28 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkd2Q8VE28 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkd2Q8VE28 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkd2Q8VE28 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.2■□□□□ 0.82
Nkd2Q8VE28 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.2■□□□□ 0.82
Nkd2Q8VE28 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkd2Q8VE28 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nkd2Q8VE28 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkd2Q8VE28 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Nkd2Q8VE28 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkd2Q8VE28 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkd2Q8VE28 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkd2Q8VE28 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Nkd2Q8VE28 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkd2Q8VE28 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkd2Q8VE28 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkd2Q8VE28 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkd2Q8VE28 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkd2Q8VE28 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nkd2Q8VE28 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkd2Q8VE28 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkd2Q8VE28 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nkd2Q8VE28 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms