Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC32.75■■■□□ 2.83
Cd109Q8R422 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Cd109Q8R422 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
Cd109Q8R422 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Cd109Q8R422 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC32.74■■■□□ 2.83
Cd109Q8R422 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC32.74■■■□□ 2.83
Cd109Q8R422 Gm43592-201ENSMUST00000196922 1165 ntBASIC32.73■■■□□ 2.83
Cd109Q8R422 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC32.73■■■□□ 2.83
Cd109Q8R422 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC32.72■■■□□ 2.83
Cd109Q8R422 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Cd109Q8R422 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Cd109Q8R422 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC32.72■■■□□ 2.83
Cd109Q8R422 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
Cd109Q8R422 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC32.7■■■□□ 2.82
Cd109Q8R422 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC32.69■■■□□ 2.82
Cd109Q8R422 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC32.69■■■□□ 2.82
Cd109Q8R422 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Cd109Q8R422 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC32.69■■■□□ 2.82
Cd109Q8R422 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC32.69■■■□□ 2.82
Cd109Q8R422 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Cd109Q8R422 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC32.69■■■□□ 2.82
Cd109Q8R422 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Cd109Q8R422 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Cd109Q8R422 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Cd109Q8R422 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Cd109Q8R422 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC32.67■■■□□ 2.82
Cd109Q8R422 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Cd109Q8R422 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Cd109Q8R422 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Cd109Q8R422 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC32.65■■■□□ 2.82
Cd109Q8R422 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
Cd109Q8R422 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Cd109Q8R422 Gm13238-201ENSMUST00000117655 780 ntBASIC32.63■■■□□ 2.81
Cd109Q8R422 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
Cd109Q8R422 AC122428.3-201ENSMUST00000215551 2290 ntBASIC32.62■■■□□ 2.81
Cd109Q8R422 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Cd109Q8R422 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC32.62■■■□□ 2.81
Cd109Q8R422 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Cd109Q8R422 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC32.61■■■□□ 2.81
Cd109Q8R422 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC32.61■■■□□ 2.81
Cd109Q8R422 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC32.61■■■□□ 2.81
Cd109Q8R422 AC117769.4-201ENSMUST00000225679 685 ntBASIC32.61■■■□□ 2.81
Cd109Q8R422 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Cd109Q8R422 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Cd109Q8R422 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC32.6■■■□□ 2.81
Cd109Q8R422 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC32.59■■■□□ 2.81
Cd109Q8R422 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC32.59■■■□□ 2.81
Cd109Q8R422 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Cd109Q8R422 Gm5522-201ENSMUST00000189483 1242 ntBASIC32.58■■■□□ 2.81
Cd109Q8R422 Gm43566-201ENSMUST00000196851 808 ntBASIC32.58■■■□□ 2.81
Cd109Q8R422 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Cd109Q8R422 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC32.57■■■□□ 2.8
Cd109Q8R422 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC32.57■■■□□ 2.8
Cd109Q8R422 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Cd109Q8R422 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Cd109Q8R422 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC32.57■■■□□ 2.8
Cd109Q8R422 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC32.56■■■□□ 2.8
Cd109Q8R422 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Cd109Q8R422 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Cd109Q8R422 Gm15546-201ENSMUST00000122095 826 ntBASIC32.55■■■□□ 2.8
Cd109Q8R422 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC32.55■■■□□ 2.8
Cd109Q8R422 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC32.55■■■□□ 2.8
Cd109Q8R422 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Cd109Q8R422 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Cd109Q8R422 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC32.54■■■□□ 2.8
Cd109Q8R422 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Cd109Q8R422 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC32.53■■■□□ 2.8
Cd109Q8R422 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC32.52■■■□□ 2.8
Cd109Q8R422 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC32.52■■■□□ 2.8
Cd109Q8R422 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC32.52■■■□□ 2.8
Cd109Q8R422 Gm45444-201ENSMUST00000211394 898 ntBASIC32.52■■■□□ 2.8
Cd109Q8R422 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC32.52■■■□□ 2.8
Cd109Q8R422 Nsd1-203ENSMUST00000224156 1149 ntBASIC32.52■■■□□ 2.8
Cd109Q8R422 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Cd109Q8R422 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.8
Cd109Q8R422 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Cd109Q8R422 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Cd109Q8R422 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC32.5■■■□□ 2.79
Cd109Q8R422 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Cd109Q8R422 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC32.5■■■□□ 2.79
Cd109Q8R422 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
Cd109Q8R422 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Cd109Q8R422 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
Cd109Q8R422 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Cd109Q8R422 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC32.48■■■□□ 2.79
Cd109Q8R422 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC32.47■■■□□ 2.79
Cd109Q8R422 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC32.47■■■□□ 2.79
Cd109Q8R422 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC32.46■■■□□ 2.79
Cd109Q8R422 Gm22567-201ENSMUST00000175542 342 ntBASIC32.45■■■□□ 2.79
Cd109Q8R422 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
Cd109Q8R422 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC32.44■■■□□ 2.78
Cd109Q8R422 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC32.44■■■□□ 2.78
Cd109Q8R422 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC32.43■■■□□ 2.78
Cd109Q8R422 AC164433.2-201ENSMUST00000226346 1701 ntBASIC32.43■■■□□ 2.78
Cd109Q8R422 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC32.43■■■□□ 2.78
Cd109Q8R422 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Cd109Q8R422 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Cd109Q8R422 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Cd109Q8R422 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Cd109Q8R422 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC32.41■■■□□ 2.78
Retrieved 100 of 76,532 protein–RNA pairs in 548.5 ms