Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ubqln1Q8R317 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ubqln1Q8R317 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Ubqln1Q8R317 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ubqln1Q8R317 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ubqln1Q8R317 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Ubqln1Q8R317 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ubqln1Q8R317 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.21■□□□□ 0.99
Ubqln1Q8R317 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ubqln1Q8R317 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ubqln1Q8R317 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ubqln1Q8R317 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ubqln1Q8R317 Terc-201ENSMUST00000082862 423 ntBASIC21.2■□□□□ 0.98
Ubqln1Q8R317 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.2■□□□□ 0.98
Ubqln1Q8R317 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ubqln1Q8R317 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ubqln1Q8R317 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ubqln1Q8R317 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Ubqln1Q8R317 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ubqln1Q8R317 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ubqln1Q8R317 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ubqln1Q8R317 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ubqln1Q8R317 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ubqln1Q8R317 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.16■□□□□ 0.98
Ubqln1Q8R317 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.16■□□□□ 0.98
Ubqln1Q8R317 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Ubqln1Q8R317 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ubqln1Q8R317 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
Ubqln1Q8R317 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ubqln1Q8R317 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ubqln1Q8R317 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ubqln1Q8R317 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ubqln1Q8R317 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ubqln1Q8R317 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.15■□□□□ 0.98
Ubqln1Q8R317 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ubqln1Q8R317 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.14■□□□□ 0.98
Ubqln1Q8R317 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.14■□□□□ 0.97
Ubqln1Q8R317 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ubqln1Q8R317 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ubqln1Q8R317 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ubqln1Q8R317 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubqln1Q8R317 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.13■□□□□ 0.97
Ubqln1Q8R317 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ubqln1Q8R317 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ubqln1Q8R317 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Ubqln1Q8R317 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubqln1Q8R317 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ubqln1Q8R317 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubqln1Q8R317 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubqln1Q8R317 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubqln1Q8R317 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Ubqln1Q8R317 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ubqln1Q8R317 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubqln1Q8R317 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ubqln1Q8R317 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubqln1Q8R317 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ubqln1Q8R317 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ubqln1Q8R317 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubqln1Q8R317 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ubqln1Q8R317 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubqln1Q8R317 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Ubqln1Q8R317 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.1■□□□□ 0.97
Ubqln1Q8R317 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ubqln1Q8R317 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
Ubqln1Q8R317 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubqln1Q8R317 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubqln1Q8R317 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubqln1Q8R317 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ubqln1Q8R317 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.09■□□□□ 0.97
Ubqln1Q8R317 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.09■□□□□ 0.97
Ubqln1Q8R317 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Ubqln1Q8R317 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.08■□□□□ 0.97
Ubqln1Q8R317 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ubqln1Q8R317 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ubqln1Q8R317 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.08■□□□□ 0.97
Ubqln1Q8R317 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ubqln1Q8R317 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ubqln1Q8R317 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ubqln1Q8R317 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubqln1Q8R317 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.07■□□□□ 0.96
Ubqln1Q8R317 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubqln1Q8R317 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubqln1Q8R317 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubqln1Q8R317 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ubqln1Q8R317 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ubqln1Q8R317 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubqln1Q8R317 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ubqln1Q8R317 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ubqln1Q8R317 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ubqln1Q8R317 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ubqln1Q8R317 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ubqln1Q8R317 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ubqln1Q8R317 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.05■□□□□ 0.96
Ubqln1Q8R317 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ubqln1Q8R317 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Ubqln1Q8R317 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Ubqln1Q8R317 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ubqln1Q8R317 Scarna2-201ENSMUST00000157560 414 ntBASIC21.04■□□□□ 0.96
Ubqln1Q8R317 Gm9806-201ENSMUST00000051080 552 ntBASIC21.04■□□□□ 0.96
Ubqln1Q8R317 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms