Protein–RNA interactions for Protein: Q8R0K2

Trim31, E3 ubiquitin-protein ligase TRIM31, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim31Q8R0K2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim31Q8R0K2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim31Q8R0K2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Trim31Q8R0K2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Trim31Q8R0K2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim31Q8R0K2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim31Q8R0K2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim31Q8R0K2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.76■■□□□ 1.07
Trim31Q8R0K2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trim31Q8R0K2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.76■■□□□ 1.07
Trim31Q8R0K2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trim31Q8R0K2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.75■■□□□ 1.07
Trim31Q8R0K2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim31Q8R0K2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim31Q8R0K2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim31Q8R0K2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Trim31Q8R0K2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trim31Q8R0K2 Mir6538-201ENSMUST00000183713 110 ntBASIC21.74■■□□□ 1.07
Trim31Q8R0K2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Trim31Q8R0K2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.74■■□□□ 1.07
Trim31Q8R0K2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim31Q8R0K2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trim31Q8R0K2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim31Q8R0K2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Trim31Q8R0K2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim31Q8R0K2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.73■■□□□ 1.07
Trim31Q8R0K2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trim31Q8R0K2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim31Q8R0K2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trim31Q8R0K2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim31Q8R0K2 Gm9812-201ENSMUST00000061934 968 ntBASIC21.73■■□□□ 1.07
Trim31Q8R0K2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim31Q8R0K2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trim31Q8R0K2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim31Q8R0K2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trim31Q8R0K2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Trim31Q8R0K2 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trim31Q8R0K2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim31Q8R0K2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim31Q8R0K2 Scarna2-201ENSMUST00000157560 414 ntBASIC21.72■■□□□ 1.07
Trim31Q8R0K2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.72■■□□□ 1.07
Trim31Q8R0K2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Trim31Q8R0K2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim31Q8R0K2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Trim31Q8R0K2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Trim31Q8R0K2 Gm9806-201ENSMUST00000051080 552 ntBASIC21.71■■□□□ 1.07
Trim31Q8R0K2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim31Q8R0K2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim31Q8R0K2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Trim31Q8R0K2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Trim31Q8R0K2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.7■■□□□ 1.06
Trim31Q8R0K2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.7■■□□□ 1.06
Trim31Q8R0K2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Trim31Q8R0K2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim31Q8R0K2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Trim31Q8R0K2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim31Q8R0K2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim31Q8R0K2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trim31Q8R0K2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Trim31Q8R0K2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim31Q8R0K2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim31Q8R0K2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim31Q8R0K2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim31Q8R0K2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim31Q8R0K2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trim31Q8R0K2 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.69■■□□□ 1.06
Trim31Q8R0K2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Trim31Q8R0K2 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Trim31Q8R0K2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim31Q8R0K2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim31Q8R0K2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trim31Q8R0K2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Trim31Q8R0K2 Gm11687-201ENSMUST00000118911 886 ntBASIC21.67■■□□□ 1.06
Trim31Q8R0K2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim31Q8R0K2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim31Q8R0K2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim31Q8R0K2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
Trim31Q8R0K2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim31Q8R0K2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim31Q8R0K2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Trim31Q8R0K2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim31Q8R0K2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim31Q8R0K2 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.65■■□□□ 1.06
Trim31Q8R0K2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim31Q8R0K2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trim31Q8R0K2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Trim31Q8R0K2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Trim31Q8R0K2 Gm16437-201ENSMUST00000025669 507 ntBASIC21.64■■□□□ 1.05
Trim31Q8R0K2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Trim31Q8R0K2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Trim31Q8R0K2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim31Q8R0K2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trim31Q8R0K2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim31Q8R0K2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Trim31Q8R0K2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.61■■□□□ 1.05
Trim31Q8R0K2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim31Q8R0K2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Trim31Q8R0K2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Trim31Q8R0K2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim31Q8R0K2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms