Protein–RNA interactions for Protein: Q8K3F2

Mmp21, Matrix metalloproteinase-21, mousemouse

Predictions only

Length 568 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp21Q8K3F2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Mmp21Q8K3F2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Mmp21Q8K3F2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Mmp21Q8K3F2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.43■■□□□ 1.02
Mmp21Q8K3F2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Mmp21Q8K3F2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Mmp21Q8K3F2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Mmp21Q8K3F2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.43■■□□□ 1.02
Mmp21Q8K3F2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Mmp21Q8K3F2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Mmp21Q8K3F2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Mmp21Q8K3F2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Mmp21Q8K3F2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Mmp21Q8K3F2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Mmp21Q8K3F2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Mmp21Q8K3F2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Mmp21Q8K3F2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Mmp21Q8K3F2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Mmp21Q8K3F2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Mmp21Q8K3F2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Mmp21Q8K3F2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Mmp21Q8K3F2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.39■■□□□ 1.01
Mmp21Q8K3F2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
Mmp21Q8K3F2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Mmp21Q8K3F2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Mmp21Q8K3F2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Mmp21Q8K3F2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Mmp21Q8K3F2 Gm44428-201ENSMUST00000204474 874 ntBASIC21.37■■□□□ 1.01
Mmp21Q8K3F2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Mmp21Q8K3F2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Mmp21Q8K3F2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Mmp21Q8K3F2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.36■■□□□ 1.01
Mmp21Q8K3F2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Mmp21Q8K3F2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Mmp21Q8K3F2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.36■■□□□ 1.01
Mmp21Q8K3F2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Mmp21Q8K3F2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Mmp21Q8K3F2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.35■■□□□ 1.01
Mmp21Q8K3F2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Mmp21Q8K3F2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.34■■□□□ 1.01
Mmp21Q8K3F2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Mmp21Q8K3F2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Mmp21Q8K3F2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Mmp21Q8K3F2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.33■■□□□ 1.01
Mmp21Q8K3F2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Mmp21Q8K3F2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Mmp21Q8K3F2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp21Q8K3F2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.32■■□□□ 1
Mmp21Q8K3F2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp21Q8K3F2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.31■■□□□ 1
Mmp21Q8K3F2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.3■■□□□ 1
Mmp21Q8K3F2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.3■■□□□ 1
Mmp21Q8K3F2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mmp21Q8K3F2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Mmp21Q8K3F2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.29■■□□□ 1
Mmp21Q8K3F2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.29■■□□□ 1
Mmp21Q8K3F2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.29■■□□□ 1
Mmp21Q8K3F2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Mmp21Q8K3F2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Mmp21Q8K3F2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mmp21Q8K3F2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Mmp21Q8K3F2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Mmp21Q8K3F2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.28■■□□□ 1
Mmp21Q8K3F2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mmp21Q8K3F2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp21Q8K3F2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp21Q8K3F2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp21Q8K3F2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Mmp21Q8K3F2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.27■■□□□ 1
Mmp21Q8K3F2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp21Q8K3F2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Mmp21Q8K3F2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Mmp21Q8K3F2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp21Q8K3F2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp21Q8K3F2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.26■□□□□ 0.99
Mmp21Q8K3F2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp21Q8K3F2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp21Q8K3F2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.25■□□□□ 0.99
Mmp21Q8K3F2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp21Q8K3F2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp21Q8K3F2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp21Q8K3F2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp21Q8K3F2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Mmp21Q8K3F2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Mmp21Q8K3F2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Mmp21Q8K3F2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mmp21Q8K3F2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Mmp21Q8K3F2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.22■□□□□ 0.99
Mmp21Q8K3F2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mmp21Q8K3F2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
Mmp21Q8K3F2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Mmp21Q8K3F2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp21Q8K3F2 Gm10420-201ENSMUST00000121713 882 ntBASIC21.21■□□□□ 0.99
Mmp21Q8K3F2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.21■□□□□ 0.99
Mmp21Q8K3F2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp21Q8K3F2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mmp21Q8K3F2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Mmp21Q8K3F2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Mmp21Q8K3F2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mmp21Q8K3F2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms