Protein–RNA interactions for Protein: Q8CJI4

H1fnt, Testis-specific H1 histone, mousemouse

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fntQ8CJI4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
H1fntQ8CJI4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
H1fntQ8CJI4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
H1fntQ8CJI4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
H1fntQ8CJI4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
H1fntQ8CJI4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.46■□□□□ 0.87
H1fntQ8CJI4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
H1fntQ8CJI4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
H1fntQ8CJI4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
H1fntQ8CJI4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
H1fntQ8CJI4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
H1fntQ8CJI4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
H1fntQ8CJI4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
H1fntQ8CJI4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
H1fntQ8CJI4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
H1fntQ8CJI4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
H1fntQ8CJI4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
H1fntQ8CJI4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
H1fntQ8CJI4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
H1fntQ8CJI4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
H1fntQ8CJI4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
H1fntQ8CJI4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H1fntQ8CJI4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H1fntQ8CJI4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H1fntQ8CJI4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
H1fntQ8CJI4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
H1fntQ8CJI4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
H1fntQ8CJI4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
H1fntQ8CJI4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
H1fntQ8CJI4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
H1fntQ8CJI4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
H1fntQ8CJI4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.41■□□□□ 0.86
H1fntQ8CJI4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
H1fntQ8CJI4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
H1fntQ8CJI4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
H1fntQ8CJI4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
H1fntQ8CJI4 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.4■□□□□ 0.86
H1fntQ8CJI4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
H1fntQ8CJI4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.39■□□□□ 0.85
H1fntQ8CJI4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.38■□□□□ 0.85
H1fntQ8CJI4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.38■□□□□ 0.85
H1fntQ8CJI4 Gm4799-201ENSMUST00000095396 657 ntBASIC20.38■□□□□ 0.85
H1fntQ8CJI4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.38■□□□□ 0.85
H1fntQ8CJI4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
H1fntQ8CJI4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
H1fntQ8CJI4 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
H1fntQ8CJI4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
H1fntQ8CJI4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.37■□□□□ 0.85
H1fntQ8CJI4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
H1fntQ8CJI4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.37■□□□□ 0.85
H1fntQ8CJI4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
H1fntQ8CJI4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
H1fntQ8CJI4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
H1fntQ8CJI4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
H1fntQ8CJI4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
H1fntQ8CJI4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.36■□□□□ 0.85
H1fntQ8CJI4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
H1fntQ8CJI4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
H1fntQ8CJI4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
H1fntQ8CJI4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
H1fntQ8CJI4 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
H1fntQ8CJI4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
H1fntQ8CJI4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
H1fntQ8CJI4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
H1fntQ8CJI4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
H1fntQ8CJI4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
H1fntQ8CJI4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.33■□□□□ 0.85
H1fntQ8CJI4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
H1fntQ8CJI4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
H1fntQ8CJI4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
H1fntQ8CJI4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
H1fntQ8CJI4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
H1fntQ8CJI4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H1fntQ8CJI4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
H1fntQ8CJI4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
H1fntQ8CJI4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
H1fntQ8CJI4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
H1fntQ8CJI4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
H1fntQ8CJI4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
H1fntQ8CJI4 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
H1fntQ8CJI4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H1fntQ8CJI4 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
H1fntQ8CJI4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
H1fntQ8CJI4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
H1fntQ8CJI4 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H1fntQ8CJI4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
H1fntQ8CJI4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
H1fntQ8CJI4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.29■□□□□ 0.84
H1fntQ8CJI4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
H1fntQ8CJI4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H1fntQ8CJI4 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.29■□□□□ 0.84
H1fntQ8CJI4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.29■□□□□ 0.84
H1fntQ8CJI4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
H1fntQ8CJI4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
H1fntQ8CJI4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
H1fntQ8CJI4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
H1fntQ8CJI4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
H1fntQ8CJI4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
H1fntQ8CJI4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.28■□□□□ 0.84
H1fntQ8CJI4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms