Protein–RNA interactions for Protein: Q8CJ61

Cmtm4, CKLF-like MARVEL transmembrane domain-containing protein 4, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cmtm4Q8CJ61 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cmtm4Q8CJ61 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cmtm4Q8CJ61 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cmtm4Q8CJ61 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cmtm4Q8CJ61 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.41■□□□□ 0.7
Cmtm4Q8CJ61 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Cmtm4Q8CJ61 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cmtm4Q8CJ61 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cmtm4Q8CJ61 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cmtm4Q8CJ61 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cmtm4Q8CJ61 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cmtm4Q8CJ61 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.4■□□□□ 0.7
Cmtm4Q8CJ61 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cmtm4Q8CJ61 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.4■□□□□ 0.7
Cmtm4Q8CJ61 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cmtm4Q8CJ61 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cmtm4Q8CJ61 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cmtm4Q8CJ61 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cmtm4Q8CJ61 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cmtm4Q8CJ61 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.39■□□□□ 0.69
Cmtm4Q8CJ61 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.39■□□□□ 0.69
Cmtm4Q8CJ61 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cmtm4Q8CJ61 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cmtm4Q8CJ61 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.37■□□□□ 0.69
Cmtm4Q8CJ61 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cmtm4Q8CJ61 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cmtm4Q8CJ61 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.37■□□□□ 0.69
Cmtm4Q8CJ61 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cmtm4Q8CJ61 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cmtm4Q8CJ61 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cmtm4Q8CJ61 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cmtm4Q8CJ61 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cmtm4Q8CJ61 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cmtm4Q8CJ61 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cmtm4Q8CJ61 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cmtm4Q8CJ61 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cmtm4Q8CJ61 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cmtm4Q8CJ61 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.35■□□□□ 0.69
Cmtm4Q8CJ61 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cmtm4Q8CJ61 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.34■□□□□ 0.69
Cmtm4Q8CJ61 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Cmtm4Q8CJ61 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cmtm4Q8CJ61 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Cmtm4Q8CJ61 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cmtm4Q8CJ61 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cmtm4Q8CJ61 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cmtm4Q8CJ61 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cmtm4Q8CJ61 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cmtm4Q8CJ61 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cmtm4Q8CJ61 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cmtm4Q8CJ61 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Cmtm4Q8CJ61 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cmtm4Q8CJ61 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cmtm4Q8CJ61 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Cmtm4Q8CJ61 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.32■□□□□ 0.68
Cmtm4Q8CJ61 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cmtm4Q8CJ61 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.31■□□□□ 0.68
Cmtm4Q8CJ61 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cmtm4Q8CJ61 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cmtm4Q8CJ61 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cmtm4Q8CJ61 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cmtm4Q8CJ61 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cmtm4Q8CJ61 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cmtm4Q8CJ61 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Cmtm4Q8CJ61 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cmtm4Q8CJ61 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Cmtm4Q8CJ61 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cmtm4Q8CJ61 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cmtm4Q8CJ61 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cmtm4Q8CJ61 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cmtm4Q8CJ61 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cmtm4Q8CJ61 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Cmtm4Q8CJ61 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cmtm4Q8CJ61 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.29■□□□□ 0.68
Cmtm4Q8CJ61 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cmtm4Q8CJ61 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cmtm4Q8CJ61 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cmtm4Q8CJ61 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cmtm4Q8CJ61 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cmtm4Q8CJ61 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cmtm4Q8CJ61 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cmtm4Q8CJ61 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cmtm4Q8CJ61 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cmtm4Q8CJ61 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cmtm4Q8CJ61 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cmtm4Q8CJ61 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cmtm4Q8CJ61 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cmtm4Q8CJ61 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Cmtm4Q8CJ61 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.26■□□□□ 0.67
Cmtm4Q8CJ61 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cmtm4Q8CJ61 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cmtm4Q8CJ61 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cmtm4Q8CJ61 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Cmtm4Q8CJ61 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cmtm4Q8CJ61 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cmtm4Q8CJ61 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cmtm4Q8CJ61 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cmtm4Q8CJ61 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cmtm4Q8CJ61 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cmtm4Q8CJ61 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms