Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hist3h2bbQ8CGP0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hist3h2bbQ8CGP0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Hist3h2bbQ8CGP0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hist3h2bbQ8CGP0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.28■□□□□ 0.36
Hist3h2bbQ8CGP0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hist3h2bbQ8CGP0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hist3h2bbQ8CGP0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hist3h2bbQ8CGP0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hist3h2bbQ8CGP0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hist3h2bbQ8CGP0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hist3h2bbQ8CGP0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hist3h2bbQ8CGP0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hist3h2bbQ8CGP0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hist3h2bbQ8CGP0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hist3h2bbQ8CGP0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hist3h2bbQ8CGP0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hist3h2bbQ8CGP0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hist3h2bbQ8CGP0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Hist3h2bbQ8CGP0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hist3h2bbQ8CGP0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hist3h2bbQ8CGP0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hist3h2bbQ8CGP0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Hist3h2bbQ8CGP0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hist3h2bbQ8CGP0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hist3h2bbQ8CGP0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hist3h2bbQ8CGP0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hist3h2bbQ8CGP0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Hist3h2bbQ8CGP0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hist3h2bbQ8CGP0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.23■□□□□ 0.35
Hist3h2bbQ8CGP0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hist3h2bbQ8CGP0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hist3h2bbQ8CGP0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hist3h2bbQ8CGP0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hist3h2bbQ8CGP0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Hist3h2bbQ8CGP0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hist3h2bbQ8CGP0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hist3h2bbQ8CGP0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Hist3h2bbQ8CGP0 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hist3h2bbQ8CGP0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Hist3h2bbQ8CGP0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hist3h2bbQ8CGP0 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.21■□□□□ 0.34
Hist3h2bbQ8CGP0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist3h2bbQ8CGP0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist3h2bbQ8CGP0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist3h2bbQ8CGP0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist3h2bbQ8CGP0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Hist3h2bbQ8CGP0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist3h2bbQ8CGP0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist3h2bbQ8CGP0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hist3h2bbQ8CGP0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Hist3h2bbQ8CGP0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist3h2bbQ8CGP0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hist3h2bbQ8CGP0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist3h2bbQ8CGP0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist3h2bbQ8CGP0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hist3h2bbQ8CGP0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Hist3h2bbQ8CGP0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist3h2bbQ8CGP0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist3h2bbQ8CGP0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist3h2bbQ8CGP0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hist3h2bbQ8CGP0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist3h2bbQ8CGP0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.18■□□□□ 0.34
Hist3h2bbQ8CGP0 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.18■□□□□ 0.34
Hist3h2bbQ8CGP0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC17.18■□□□□ 0.34
Hist3h2bbQ8CGP0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist3h2bbQ8CGP0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist3h2bbQ8CGP0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist3h2bbQ8CGP0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hist3h2bbQ8CGP0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hist3h2bbQ8CGP0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.17■□□□□ 0.34
Hist3h2bbQ8CGP0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hist3h2bbQ8CGP0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hist3h2bbQ8CGP0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hist3h2bbQ8CGP0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hist3h2bbQ8CGP0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Hist3h2bbQ8CGP0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Hist3h2bbQ8CGP0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hist3h2bbQ8CGP0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hist3h2bbQ8CGP0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist3h2bbQ8CGP0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist3h2bbQ8CGP0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist3h2bbQ8CGP0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist3h2bbQ8CGP0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Hist3h2bbQ8CGP0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Hist3h2bbQ8CGP0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hist3h2bbQ8CGP0 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.14■□□□□ 0.33
Hist3h2bbQ8CGP0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.14■□□□□ 0.33
Hist3h2bbQ8CGP0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hist3h2bbQ8CGP0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hist3h2bbQ8CGP0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hist3h2bbQ8CGP0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Hist3h2bbQ8CGP0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hist3h2bbQ8CGP0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hist3h2bbQ8CGP0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hist3h2bbQ8CGP0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hist3h2bbQ8CGP0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Hist3h2bbQ8CGP0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hist3h2bbQ8CGP0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hist3h2bbQ8CGP0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 108.6 ms