Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Trim52Q8CDV4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
Trim52Q8CDV4 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
Trim52Q8CDV4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Trim52Q8CDV4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Trim52Q8CDV4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Trim52Q8CDV4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Trim52Q8CDV4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
Trim52Q8CDV4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
Trim52Q8CDV4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Trim52Q8CDV4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Trim52Q8CDV4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Trim52Q8CDV4 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Trim52Q8CDV4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Trim52Q8CDV4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Trim52Q8CDV4 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Trim52Q8CDV4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Trim52Q8CDV4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Trim52Q8CDV4 AC117769.4-201ENSMUST00000225679 685 ntBASIC28.4■■■□□ 2.14
Trim52Q8CDV4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Trim52Q8CDV4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC28.39■■■□□ 2.14
Trim52Q8CDV4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Trim52Q8CDV4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
Trim52Q8CDV4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.13
Trim52Q8CDV4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Trim52Q8CDV4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
Trim52Q8CDV4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC28.37■■■□□ 2.13
Trim52Q8CDV4 Gm43592-201ENSMUST00000196922 1165 ntBASIC28.37■■■□□ 2.13
Trim52Q8CDV4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
Trim52Q8CDV4 Gm5812-201ENSMUST00000061073 957 ntBASIC28.37■■■□□ 2.13
Trim52Q8CDV4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC28.35■■■□□ 2.13
Trim52Q8CDV4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Trim52Q8CDV4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Trim52Q8CDV4 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Trim52Q8CDV4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC28.34■■■□□ 2.13
Trim52Q8CDV4 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Trim52Q8CDV4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
Trim52Q8CDV4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Trim52Q8CDV4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Trim52Q8CDV4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Trim52Q8CDV4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC28.32■■■□□ 2.12
Trim52Q8CDV4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Trim52Q8CDV4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Trim52Q8CDV4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
Trim52Q8CDV4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Trim52Q8CDV4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Trim52Q8CDV4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
Trim52Q8CDV4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Trim52Q8CDV4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Trim52Q8CDV4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
Trim52Q8CDV4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Trim52Q8CDV4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Trim52Q8CDV4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Trim52Q8CDV4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Trim52Q8CDV4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC28.28■■■□□ 2.12
Trim52Q8CDV4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Trim52Q8CDV4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC28.28■■■□□ 2.12
Trim52Q8CDV4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
Trim52Q8CDV4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Trim52Q8CDV4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC28.27■■■□□ 2.12
Trim52Q8CDV4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Trim52Q8CDV4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Trim52Q8CDV4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
Trim52Q8CDV4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC28.26■■■□□ 2.11
Trim52Q8CDV4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC28.26■■■□□ 2.11
Trim52Q8CDV4 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC28.26■■■□□ 2.11
Trim52Q8CDV4 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Trim52Q8CDV4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Trim52Q8CDV4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Trim52Q8CDV4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Trim52Q8CDV4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC28.23■■■□□ 2.11
Trim52Q8CDV4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
Trim52Q8CDV4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
Trim52Q8CDV4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Trim52Q8CDV4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Trim52Q8CDV4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Trim52Q8CDV4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC28.22■■■□□ 2.11
Trim52Q8CDV4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC28.22■■■□□ 2.11
Trim52Q8CDV4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
Trim52Q8CDV4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Trim52Q8CDV4 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Trim52Q8CDV4 Gm13238-201ENSMUST00000117655 780 ntBASIC28.21■■■□□ 2.11
Trim52Q8CDV4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Trim52Q8CDV4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
Trim52Q8CDV4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
Trim52Q8CDV4 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Trim52Q8CDV4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
Trim52Q8CDV4 Gm7199-201ENSMUST00000118327 1485 ntBASIC28.19■■■□□ 2.1
Trim52Q8CDV4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC28.18■■■□□ 2.1
Trim52Q8CDV4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Trim52Q8CDV4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Trim52Q8CDV4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Trim52Q8CDV4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Trim52Q8CDV4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Trim52Q8CDV4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC28.18■■■□□ 2.1
Trim52Q8CDV4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
Trim52Q8CDV4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Trim52Q8CDV4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Trim52Q8CDV4 Nsd1-203ENSMUST00000224156 1149 ntBASIC28.17■■■□□ 2.1
Trim52Q8CDV4 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms