Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.27■□□□□ 0.84
Lysmd4Q8CC84 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lysmd4Q8CC84 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lysmd4Q8CC84 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.27■□□□□ 0.83
Lysmd4Q8CC84 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Lysmd4Q8CC84 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lysmd4Q8CC84 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.25■□□□□ 0.83
Lysmd4Q8CC84 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lysmd4Q8CC84 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lysmd4Q8CC84 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lysmd4Q8CC84 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lysmd4Q8CC84 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lysmd4Q8CC84 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lysmd4Q8CC84 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lysmd4Q8CC84 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Lysmd4Q8CC84 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lysmd4Q8CC84 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Lysmd4Q8CC84 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lysmd4Q8CC84 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lysmd4Q8CC84 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lysmd4Q8CC84 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lysmd4Q8CC84 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Lysmd4Q8CC84 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.21■□□□□ 0.83
Lysmd4Q8CC84 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lysmd4Q8CC84 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lysmd4Q8CC84 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.21■□□□□ 0.83
Lysmd4Q8CC84 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Lysmd4Q8CC84 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Lysmd4Q8CC84 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Lysmd4Q8CC84 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lysmd4Q8CC84 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lysmd4Q8CC84 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
Lysmd4Q8CC84 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.2■□□□□ 0.82
Lysmd4Q8CC84 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lysmd4Q8CC84 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lysmd4Q8CC84 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
Lysmd4Q8CC84 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lysmd4Q8CC84 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Lysmd4Q8CC84 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.18■□□□□ 0.82
Lysmd4Q8CC84 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.17■□□□□ 0.82
Lysmd4Q8CC84 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lysmd4Q8CC84 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lysmd4Q8CC84 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lysmd4Q8CC84 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lysmd4Q8CC84 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.16■□□□□ 0.82
Lysmd4Q8CC84 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lysmd4Q8CC84 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lysmd4Q8CC84 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Lysmd4Q8CC84 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.15■□□□□ 0.82
Lysmd4Q8CC84 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lysmd4Q8CC84 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Lysmd4Q8CC84 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Lysmd4Q8CC84 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lysmd4Q8CC84 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lysmd4Q8CC84 Gm37136-201ENSMUST00000194368 194 ntBASIC20.14■□□□□ 0.81
Lysmd4Q8CC84 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lysmd4Q8CC84 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lysmd4Q8CC84 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.13■□□□□ 0.81
Lysmd4Q8CC84 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lysmd4Q8CC84 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lysmd4Q8CC84 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lysmd4Q8CC84 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.13■□□□□ 0.81
Lysmd4Q8CC84 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lysmd4Q8CC84 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lysmd4Q8CC84 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lysmd4Q8CC84 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Lysmd4Q8CC84 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lysmd4Q8CC84 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lysmd4Q8CC84 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lysmd4Q8CC84 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lysmd4Q8CC84 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.12■□□□□ 0.81
Lysmd4Q8CC84 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Lysmd4Q8CC84 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lysmd4Q8CC84 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.12■□□□□ 0.81
Lysmd4Q8CC84 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lysmd4Q8CC84 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lysmd4Q8CC84 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lysmd4Q8CC84 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.1■□□□□ 0.81
Lysmd4Q8CC84 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lysmd4Q8CC84 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.1■□□□□ 0.81
Lysmd4Q8CC84 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lysmd4Q8CC84 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lysmd4Q8CC84 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.1■□□□□ 0.81
Lysmd4Q8CC84 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.1■□□□□ 0.81
Lysmd4Q8CC84 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Lysmd4Q8CC84 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lysmd4Q8CC84 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lysmd4Q8CC84 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lysmd4Q8CC84 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lysmd4Q8CC84 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.09■□□□□ 0.81
Lysmd4Q8CC84 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lysmd4Q8CC84 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lysmd4Q8CC84 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
Lysmd4Q8CC84 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Lysmd4Q8CC84 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lysmd4Q8CC84 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lysmd4Q8CC84 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Lysmd4Q8CC84 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Lysmd4Q8CC84 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lysmd4Q8CC84 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms