Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
Trim9Q8C7M3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.95■■□□□ 1.58
Trim9Q8C7M3 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.95■■□□□ 1.58
Trim9Q8C7M3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
Trim9Q8C7M3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
Trim9Q8C7M3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Trim9Q8C7M3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.95■■□□□ 1.58
Trim9Q8C7M3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Trim9Q8C7M3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Trim9Q8C7M3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Trim9Q8C7M3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Trim9Q8C7M3 Terc-201ENSMUST00000082862 423 ntBASIC24.92■■□□□ 1.58
Trim9Q8C7M3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
Trim9Q8C7M3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Trim9Q8C7M3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Trim9Q8C7M3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Trim9Q8C7M3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Trim9Q8C7M3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Trim9Q8C7M3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Trim9Q8C7M3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Trim9Q8C7M3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC24.91■■□□□ 1.58
Trim9Q8C7M3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.91■■□□□ 1.58
Trim9Q8C7M3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.91■■□□□ 1.58
Trim9Q8C7M3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Trim9Q8C7M3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC24.91■■□□□ 1.58
Trim9Q8C7M3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Trim9Q8C7M3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.9■■□□□ 1.58
Trim9Q8C7M3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Trim9Q8C7M3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Trim9Q8C7M3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Trim9Q8C7M3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC24.9■■□□□ 1.58
Trim9Q8C7M3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Trim9Q8C7M3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Trim9Q8C7M3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Trim9Q8C7M3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Trim9Q8C7M3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC24.88■■□□□ 1.57
Trim9Q8C7M3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Trim9Q8C7M3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Trim9Q8C7M3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC24.88■■□□□ 1.57
Trim9Q8C7M3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Trim9Q8C7M3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC24.87■■□□□ 1.57
Trim9Q8C7M3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Trim9Q8C7M3 Gm6311-201ENSMUST00000073790 878 ntBASIC24.87■■□□□ 1.57
Trim9Q8C7M3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Trim9Q8C7M3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.86■■□□□ 1.57
Trim9Q8C7M3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Trim9Q8C7M3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Trim9Q8C7M3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Trim9Q8C7M3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Trim9Q8C7M3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC24.85■■□□□ 1.57
Trim9Q8C7M3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
Trim9Q8C7M3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Trim9Q8C7M3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Trim9Q8C7M3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Trim9Q8C7M3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Trim9Q8C7M3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Trim9Q8C7M3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC24.84■■□□□ 1.57
Trim9Q8C7M3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.84■■□□□ 1.57
Trim9Q8C7M3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Trim9Q8C7M3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Trim9Q8C7M3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24.83■■□□□ 1.57
Trim9Q8C7M3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC24.83■■□□□ 1.57
Trim9Q8C7M3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Trim9Q8C7M3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Trim9Q8C7M3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC24.83■■□□□ 1.56
Trim9Q8C7M3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
Trim9Q8C7M3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Trim9Q8C7M3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trim9Q8C7M3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trim9Q8C7M3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Trim9Q8C7M3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trim9Q8C7M3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trim9Q8C7M3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trim9Q8C7M3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Trim9Q8C7M3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Trim9Q8C7M3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Trim9Q8C7M3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Trim9Q8C7M3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Trim9Q8C7M3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC24.79■■□□□ 1.56
Trim9Q8C7M3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Trim9Q8C7M3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Trim9Q8C7M3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Trim9Q8C7M3 Gm9910-201ENSMUST00000195385 1550 ntBASIC24.79■■□□□ 1.56
Trim9Q8C7M3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
Trim9Q8C7M3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Trim9Q8C7M3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.78■■□□□ 1.56
Trim9Q8C7M3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Trim9Q8C7M3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Trim9Q8C7M3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
Trim9Q8C7M3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim9Q8C7M3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
Trim9Q8C7M3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim9Q8C7M3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
Trim9Q8C7M3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
Trim9Q8C7M3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Trim9Q8C7M3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC24.76■■□□□ 1.55
Trim9Q8C7M3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Trim9Q8C7M3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Trim9Q8C7M3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Trim9Q8C7M3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC24.74■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms