Protein–RNA interactions for Protein: Q8C5N3

Cwc22, Pre-mRNA-splicing factor CWC22 homolog, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cwc22Q8C5N3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Cwc22Q8C5N3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Cwc22Q8C5N3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Cwc22Q8C5N3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Cwc22Q8C5N3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Cwc22Q8C5N3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Cwc22Q8C5N3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Cwc22Q8C5N3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC31.31■■■□□ 2.6
Cwc22Q8C5N3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Cwc22Q8C5N3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Cwc22Q8C5N3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC31.3■■■□□ 2.6
Cwc22Q8C5N3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC31.3■■■□□ 2.6
Cwc22Q8C5N3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC31.3■■■□□ 2.6
Cwc22Q8C5N3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC31.29■■■□□ 2.6
Cwc22Q8C5N3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
Cwc22Q8C5N3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Cwc22Q8C5N3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Cwc22Q8C5N3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Cwc22Q8C5N3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Cwc22Q8C5N3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Cwc22Q8C5N3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Cwc22Q8C5N3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Cwc22Q8C5N3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Cwc22Q8C5N3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
Cwc22Q8C5N3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
Cwc22Q8C5N3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Cwc22Q8C5N3 Mir6538-201ENSMUST00000183713 110 ntBASIC31.25■■■□□ 2.59
Cwc22Q8C5N3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
Cwc22Q8C5N3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC31.25■■■□□ 2.59
Cwc22Q8C5N3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Cwc22Q8C5N3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Cwc22Q8C5N3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Cwc22Q8C5N3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Cwc22Q8C5N3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Cwc22Q8C5N3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Cwc22Q8C5N3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Cwc22Q8C5N3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
Cwc22Q8C5N3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC31.22■■■□□ 2.59
Cwc22Q8C5N3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
Cwc22Q8C5N3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Cwc22Q8C5N3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC31.21■■■□□ 2.59
Cwc22Q8C5N3 Gm44428-201ENSMUST00000204474 874 ntBASIC31.2■■■□□ 2.59
Cwc22Q8C5N3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
Cwc22Q8C5N3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Cwc22Q8C5N3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Cwc22Q8C5N3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC31.2■■■□□ 2.58
Cwc22Q8C5N3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC31.19■■■□□ 2.58
Cwc22Q8C5N3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
Cwc22Q8C5N3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
Cwc22Q8C5N3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
Cwc22Q8C5N3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Cwc22Q8C5N3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Cwc22Q8C5N3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC31.18■■■□□ 2.58
Cwc22Q8C5N3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC31.17■■■□□ 2.58
Cwc22Q8C5N3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC31.17■■■□□ 2.58
Cwc22Q8C5N3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC31.17■■■□□ 2.58
Cwc22Q8C5N3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Cwc22Q8C5N3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Cwc22Q8C5N3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Cwc22Q8C5N3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Cwc22Q8C5N3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
Cwc22Q8C5N3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
Cwc22Q8C5N3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Cwc22Q8C5N3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Cwc22Q8C5N3 Gm7199-201ENSMUST00000118327 1485 ntBASIC31.14■■■□□ 2.57
Cwc22Q8C5N3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Cwc22Q8C5N3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Cwc22Q8C5N3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Cwc22Q8C5N3 AC151971.4-201ENSMUST00000214717 704 ntBASIC31.12■■■□□ 2.57
Cwc22Q8C5N3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Cwc22Q8C5N3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
Cwc22Q8C5N3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Cwc22Q8C5N3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Cwc22Q8C5N3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Cwc22Q8C5N3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Cwc22Q8C5N3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
Cwc22Q8C5N3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Cwc22Q8C5N3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
Cwc22Q8C5N3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC31.09■■■□□ 2.57
Cwc22Q8C5N3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Cwc22Q8C5N3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC31.08■■■□□ 2.57
Cwc22Q8C5N3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Cwc22Q8C5N3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Cwc22Q8C5N3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Cwc22Q8C5N3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Cwc22Q8C5N3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Cwc22Q8C5N3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
Cwc22Q8C5N3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC31.05■■■□□ 2.56
Cwc22Q8C5N3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Cwc22Q8C5N3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
Cwc22Q8C5N3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
Cwc22Q8C5N3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Cwc22Q8C5N3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
Cwc22Q8C5N3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Cwc22Q8C5N3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC31.03■■■□□ 2.56
Cwc22Q8C5N3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Cwc22Q8C5N3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Cwc22Q8C5N3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Cwc22Q8C5N3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC31.01■■■□□ 2.55
Cwc22Q8C5N3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms