Protein–RNA interactions for Protein: Q8BV57

Ssc5d, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, mousemouse

Predictions only

Length 1,371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssc5dQ8BV57 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
Ssc5dQ8BV57 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC28.24■■■□□ 2.11
Ssc5dQ8BV57 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Ssc5dQ8BV57 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
Ssc5dQ8BV57 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Ssc5dQ8BV57 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Ssc5dQ8BV57 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
Ssc5dQ8BV57 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC28.23■■■□□ 2.11
Ssc5dQ8BV57 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Ssc5dQ8BV57 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Ssc5dQ8BV57 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Ssc5dQ8BV57 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Ssc5dQ8BV57 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ssc5dQ8BV57 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ssc5dQ8BV57 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ssc5dQ8BV57 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC28.2■■■□□ 2.1
Ssc5dQ8BV57 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Ssc5dQ8BV57 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC28.19■■■□□ 2.1
Ssc5dQ8BV57 Gm5522-201ENSMUST00000189483 1242 ntBASIC28.19■■■□□ 2.1
Ssc5dQ8BV57 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Ssc5dQ8BV57 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Ssc5dQ8BV57 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
Ssc5dQ8BV57 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Ssc5dQ8BV57 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC28.18■■■□□ 2.1
Ssc5dQ8BV57 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC28.18■■■□□ 2.1
Ssc5dQ8BV57 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC28.17■■■□□ 2.1
Ssc5dQ8BV57 Gm15546-201ENSMUST00000122095 826 ntBASIC28.17■■■□□ 2.1
Ssc5dQ8BV57 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC28.17■■■□□ 2.1
Ssc5dQ8BV57 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
Ssc5dQ8BV57 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
Ssc5dQ8BV57 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Ssc5dQ8BV57 Gm22567-201ENSMUST00000175542 342 ntBASIC28.16■■■□□ 2.1
Ssc5dQ8BV57 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
Ssc5dQ8BV57 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Ssc5dQ8BV57 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC28.15■■■□□ 2.1
Ssc5dQ8BV57 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Ssc5dQ8BV57 Gm43566-201ENSMUST00000196851 808 ntBASIC28.15■■■□□ 2.1
Ssc5dQ8BV57 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Ssc5dQ8BV57 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
Ssc5dQ8BV57 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Ssc5dQ8BV57 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ssc5dQ8BV57 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ssc5dQ8BV57 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Ssc5dQ8BV57 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC28.12■■■□□ 2.09
Ssc5dQ8BV57 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
Ssc5dQ8BV57 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
Ssc5dQ8BV57 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Ssc5dQ8BV57 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Ssc5dQ8BV57 Nsd1-203ENSMUST00000224156 1149 ntBASIC28.11■■■□□ 2.09
Ssc5dQ8BV57 Gm45444-201ENSMUST00000211394 898 ntBASIC28.1■■■□□ 2.09
Ssc5dQ8BV57 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC28.1■■■□□ 2.09
Ssc5dQ8BV57 AC117769.4-201ENSMUST00000225679 685 ntBASIC28.1■■■□□ 2.09
Ssc5dQ8BV57 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Ssc5dQ8BV57 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC28.09■■■□□ 2.09
Ssc5dQ8BV57 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC28.09■■■□□ 2.09
Ssc5dQ8BV57 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC28.09■■■□□ 2.09
Ssc5dQ8BV57 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Ssc5dQ8BV57 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
Ssc5dQ8BV57 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Ssc5dQ8BV57 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Ssc5dQ8BV57 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Ssc5dQ8BV57 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Ssc5dQ8BV57 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Ssc5dQ8BV57 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Ssc5dQ8BV57 AC122428.3-201ENSMUST00000215551 2290 ntBASIC28.05■■■□□ 2.08
Ssc5dQ8BV57 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Ssc5dQ8BV57 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
Ssc5dQ8BV57 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Ssc5dQ8BV57 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Ssc5dQ8BV57 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
Ssc5dQ8BV57 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
Ssc5dQ8BV57 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC28.03■■■□□ 2.08
Ssc5dQ8BV57 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
Ssc5dQ8BV57 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Ssc5dQ8BV57 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Ssc5dQ8BV57 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Ssc5dQ8BV57 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
Ssc5dQ8BV57 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC28■■■□□ 2.07
Ssc5dQ8BV57 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC28■■■□□ 2.07
Ssc5dQ8BV57 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Ssc5dQ8BV57 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Ssc5dQ8BV57 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC28■■■□□ 2.07
Ssc5dQ8BV57 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC28■■■□□ 2.07
Ssc5dQ8BV57 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Ssc5dQ8BV57 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC27.99■■■□□ 2.07
Ssc5dQ8BV57 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC27.99■■■□□ 2.07
Ssc5dQ8BV57 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC27.99■■■□□ 2.07
Ssc5dQ8BV57 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC27.99■■■□□ 2.07
Ssc5dQ8BV57 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
Ssc5dQ8BV57 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Ssc5dQ8BV57 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC27.98■■■□□ 2.07
Ssc5dQ8BV57 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC27.98■■■□□ 2.07
Ssc5dQ8BV57 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
Ssc5dQ8BV57 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Ssc5dQ8BV57 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Ssc5dQ8BV57 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC27.97■■■□□ 2.07
Ssc5dQ8BV57 AC164433.2-201ENSMUST00000226346 1701 ntBASIC27.96■■■□□ 2.07
Ssc5dQ8BV57 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Ssc5dQ8BV57 AC093043.1-201ENSMUST00000226700 898 ntBASIC27.95■■■□□ 2.06
Ssc5dQ8BV57 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms