Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.27■■□□□ 1
Prpf18Q8BM39 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.27■■□□□ 1
Prpf18Q8BM39 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Prpf18Q8BM39 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prpf18Q8BM39 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Prpf18Q8BM39 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Prpf18Q8BM39 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Prpf18Q8BM39 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Prpf18Q8BM39 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prpf18Q8BM39 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf18Q8BM39 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Prpf18Q8BM39 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf18Q8BM39 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf18Q8BM39 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf18Q8BM39 Particl-201ENSMUST00000205370 1560 ntBASIC21.25■□□□□ 0.99
Prpf18Q8BM39 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf18Q8BM39 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf18Q8BM39 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf18Q8BM39 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf18Q8BM39 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf18Q8BM39 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf18Q8BM39 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf18Q8BM39 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Prpf18Q8BM39 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Prpf18Q8BM39 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prpf18Q8BM39 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Prpf18Q8BM39 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.23■□□□□ 0.99
Prpf18Q8BM39 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prpf18Q8BM39 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.23■□□□□ 0.99
Prpf18Q8BM39 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prpf18Q8BM39 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prpf18Q8BM39 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prpf18Q8BM39 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prpf18Q8BM39 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf18Q8BM39 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Prpf18Q8BM39 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf18Q8BM39 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf18Q8BM39 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Prpf18Q8BM39 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Prpf18Q8BM39 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf18Q8BM39 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf18Q8BM39 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf18Q8BM39 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.21■□□□□ 0.99
Prpf18Q8BM39 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf18Q8BM39 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prpf18Q8BM39 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Prpf18Q8BM39 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Prpf18Q8BM39 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Prpf18Q8BM39 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prpf18Q8BM39 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.19■□□□□ 0.98
Prpf18Q8BM39 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Prpf18Q8BM39 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prpf18Q8BM39 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prpf18Q8BM39 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prpf18Q8BM39 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prpf18Q8BM39 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Prpf18Q8BM39 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prpf18Q8BM39 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.18■□□□□ 0.98
Prpf18Q8BM39 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prpf18Q8BM39 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Prpf18Q8BM39 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prpf18Q8BM39 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prpf18Q8BM39 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prpf18Q8BM39 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.17■□□□□ 0.98
Prpf18Q8BM39 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf18Q8BM39 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf18Q8BM39 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.15■□□□□ 0.98
Prpf18Q8BM39 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf18Q8BM39 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf18Q8BM39 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.15■□□□□ 0.98
Prpf18Q8BM39 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf18Q8BM39 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf18Q8BM39 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Prpf18Q8BM39 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Prpf18Q8BM39 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Prpf18Q8BM39 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Prpf18Q8BM39 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.14■□□□□ 0.97
Prpf18Q8BM39 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Prpf18Q8BM39 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf18Q8BM39 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
Prpf18Q8BM39 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Prpf18Q8BM39 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Prpf18Q8BM39 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf18Q8BM39 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf18Q8BM39 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.13■□□□□ 0.97
Prpf18Q8BM39 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf18Q8BM39 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf18Q8BM39 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf18Q8BM39 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf18Q8BM39 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf18Q8BM39 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf18Q8BM39 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf18Q8BM39 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf18Q8BM39 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf18Q8BM39 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf18Q8BM39 Nkain2-201ENSMUST00000092602 558 ntBASIC21.11■□□□□ 0.97
Prpf18Q8BM39 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Prpf18Q8BM39 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf18Q8BM39 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf18Q8BM39 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms